Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g713 ATGGGTCCAGTCGCAGGACCCTTTTCTGAAGAGAAGCTAGTGTGCCAATTCACTGGAAACATGATCCATTCAAAGGGCATTTTTCTTGGAGATGACCCTTTTAATTTTAGCTTGCCTATGCTCTTGGCACAGGGCATTCTGATTCTGCTTTTAACCAGAACCACTTACTACTTTCTGAAACCTCTTGGACAGGGTATGATCTCAGCACAAATTATAGCTGGTATTATCATGGGCCCCTCCATTCTAGGACATGATGGGGCTTATGCAGAGAAGTTGTTTCCACCAGGAGGCAAATTGGTACTTGAAACACTCGCAAATGTTGGCTTCATGCTTCACCTCTTTTTAGTAGGATTGCAGATGGACCCAAGGATATTAAAAAAGGCTGGGAAAACTGCAGTTCTAATAGGCATTGGGGGTTTCATATTGCCTTATGGACTTGGTGAATTGGCGTTTATCATCATACATCATGTGATGACTCTTGATAGGAAATTATCGGTTTCCATTCCTTTCATGGTGGCACTAAATTCTATGACTTCCTTTGTTGTTGTTAGCAGCCTCCTTACTGATCTTAATATTCTGAATTCAGAGCTGGGCCGCTTAGCTACCCAGACATCCATGGTCAGTGACTTGTGTAGCTGGTTCATGGCTACAATGATGAACACAGTAGGCATTGCCGCCCGTGACTCAGATTGGATGTTGCTATGGTCTCTGATATGGCTGCTCATCTTTCTTATCAGCATTGTGTTTGTCTTCCGGCCAATAATAATCTGGATATCGAAACAAACTCCAGAAGGAGAACGAATGGACGAAGTTCTCTTCTTCATCATCATTGTAATGATAATGGGTTGTGCATTCTGTGCTGAGGTCCTTGGCCAGCATGCTGCCTTAGGCCCTTTAGTGTTAGGCATGGCTCTCCCTGATGGACCACCAATTGGAACAATTTTACTGCAGAAGTTTGATACTATGGTTACTGGCTTGCTACTGCCAATTTTCTTTGCTCTCAGTGGCTCAAAAACGAAACTGTTCTCCCTAGGAAAAGGAATGTTTCCCTTCATGGTCGAGTTCATCATCATTTTGGGCTATATAGGGAAGTTCACAGGCACACTTATTCCAGCAATCTTCTCTGGTGTTCCTCGCTGGGATTCTTTATGTCTTGCTATGATCATGTGTTGCAAAGGCATTATCGAGGTTGCCACATACAGCATGTGGAAGGATAGAAAGATCTTAAGCTACCAATCCTATAGCCTTCTGTTAATCACCATGCTGATTGTCACAGGGGTCTGCAGACCCATTGTCGGTTACCTTTATGATCCAGCAAGTAGTCACATGTCCTATAGCAGAAAAAGCATTATGTACCCTAAGCATGATTCGGAGTTTCGAATATTGGTCTGCATCCACAATGAACACAATGTGTCCACCATTATAAACCTCCTTGAAGCCTCACATGCCACCAAAAGCAGCCCCATCTCCATCGTTGCCCTTTGCCTCATGGAGCTCACTGGCAGTTCATCATCTGTTCTTGAATCATATGACTCGAAAAAGAAACTCACTTCTGGTGTAACCCACTTGGGGCATATTATCAATGCCTTCAACTATTATGAGCAGCACAACCATGGGCGTGTGACAGTGCAGCATTTTACGGCCATTGCACCTTATTCAAGCATGCATACAGATATATGTGCTATAGCACTAGAGATGAGGGCGAACATAGTTATCGTCCCCTTCCATAAGCAGATGGCCTTTGGTGGAACAGAGGAAGCTACAGCCACCTCTATTAAGACTGTAAACCTGAATGTCATTGATAAGGCTCCTTGCTCTGTTGGGATCCTGGTTGACAGGGGCCACATTGGTGGGCACAGGTCATTTGTGGCTGGGCATTCATTGTACCATATTGCTTTGCTCTTTCTTGGTGGGGCTGATGATCGAGAAGCTCTTTCATACAGCAGACGTATGGCTGAGGATCCAAAGATAAGACTCACGGTTGTCTGTTTTAGACCATGGGGGGAGCAGGCTTACACTGAAGAAACTGAGGAGTATCTTGACAAAAAGCTGATGAATGAGTTTAAGGCTGATGCAGTGGACAAGATTGTTTACAGTGAAGTCATTGTTAAAGATGGGGAAGGAACAACACAGGTGATTCGGTCCATGGAGGAAGGTTTTGATTTATTTATAGTGGGTAGACACCATGATAAGTCTCCATTTACATTAGGCCTTACTGAATGGCATGAATGCACCGAGCTTGGGCTGATTGGGGATATGCTGGCCGGTTCAGATTTTCTCTTTTCGGTATTGGTGGTGCAGCAGCAGCCATTTGGATTAGGGGCAGTTTCTACTGGCAAGAGACGGGGGAGGACCAATCCAAGATCCGGCCAAATGCCAGAGCAGCTCCTTTCTTGCACGGAATTACCACCAAAGGTGAATTCCTTTGGTGTATGGAAATATGAGAAAGGGCCACTGAAGTTTCCTTTGCCATTGCTGCAAATGCAGATTCTCGCCATTCTTGCAGTTATTCACACGCTTCATTTTGTTCTCAAGCATTTAGGACTCCCCATGCTCATTTCTGAGATTGCTGCTGGACTACTGCTGGGTGGATCAGCGCTGGGGAACATCTCGGCCTATTCAGAAATGTTTCTCAATGTAGAAAGTCAGAATATAATTGGTACTCTATCAATATTTGGGTACACACTTTTTATGTTTCTAATTGGAGTGAAAATGGATATGGGCATGATAAGTAACACAGGCAAAAAGGCCTTGGCTGTTGGGATATTAGCCCTTTTGGGGCCATTAATAGTTGGTATGGCCGTCGCAGTAATCTGCCTTGAGTTTTGGGCGAAAGAAGCCACGAATCTTACCTATATAGCAGCAGTGCATTCTCTGACGCCATTCCCAGTCATCGCTTGCCTCCTCAGTGAACTCAAAATCCTGAATTCGGAGCTTGGCCGGCTAGCACTGTCTTCAGCTATAGTCAGCGACTTATTTAGCTTATTCCTCACCATTGTTTCCGTCGTGGTTAGGACCCGTGAAGGCGCACCATGGCATACAGCGGTGGTAACCGTGGTATCACCTGTTGTTTTTGTCCTTGTGGTTGTGTACATCCTCCGCCCGGCCATGTTCTGGGTCGTTGCACAGACACCAGAAGGCAGGGCGGTCAAGAATGTGTACATTTACGCTATCATTTTGGGGCTCCTTTTTTGTGGTATCTTTTCTGATTTTTTTGGACAGTATGTTATCTTTGGGGCATTTATCTTCGGTCTGGCTGTACCAGATGGACCCCCATTAGGCTCTGCTCTGGTGGAAAAGCTCGATTCCATGGTCTCACTTGTTCTTATGCCAATCTTCATGGCTACATGTGCCATGAGAGCAAATGTGATTGACGTCTTCAGGAAAGGAGACAAGGAAACAGTAGCCAATATTTTTATCATTCTTGCCACTCTTATAGCAAAAATTGGAGCCTGCGTGGCACCTCTCTTGTATTGCAAGATGCCCTGTAATGATGCTTTAGCACTTAGCCTCATCATGAGCGCCAAAGGCACTGTAAACATGGCCACCCAAAGCGTTCTAAGGGACAGCGGGGTGGTGGATGATGAAATATTTGGACTAATGGTTATTGCTACAACCTTGAACGCAGCTATTGTGCCATTCCTGGTGAGAAAACTCTATGATCCTTCAAGGAAATATGCAGGCTACCAGACAAGGAACATTATGCATTGCAAACCCAACGCCGAGCTTCGCATACTTGCATGTGTCCATGAACAAGAAGGCGTAACCTCCATCATCAACCTGCTCAATGCCTCCAATCCTACCAGAGACAACCCCATCTCCATTTATAGGACTGTTTCTAATCACTCCTACTCCGAAAATGTCATCCTTGCGCTCAATCGCTACCAGCGGAACAATGGAGGTGCTGCCTTGACCCATGTCTTTACAGCCATCTCTCCCCACAAGCTCATGCATGAGGATATATGCACTCTTGCGCTAAACAAACTGGCTCTATTTATGATAATCCCCTTCCACCGTAAATGGAACATCGGTGGGTCTATTGAATCAGACGAGCAAAGGATAAGGAACCTTAATTGCAGTGTCCTGGACATGGCTCCTTGCTCTGTAGGGATTCTTGTTGACCGCCCCAACGTGAACCTCACAATAGCTCATTTCTTGCCCATGGACGATGAAAACACAAACGAGTGGGAAAATATTCTTGATGATGAGGCACTCAAGGATATTAAACATAGTAATCTGGGCTTTGAACAAGTTAACTATTTACAGAGAGTTGTGAAAGATGGACCTGAGACGGCATTGATTGTTCGATCAATGACTAGTCAGTATGACCTCATAATAGTAGGGAGACGGCACGGTGTAGAATCGCCTCTTACATCAGGCCTCACAGAATGGAGTGAATTCCCAGAGCTTGGGGCCCTTGGAGACCTGCTTGCAGCATCAGATCTAGACAGCAATGCTTCTGTATTGGTTGTGCAACAACAACGAAAGTTGTAA 4494 45.15 MGPVAGPFSEEKLVCQFTGNMIHSKGIFLGDDPFNFSLPMLLAQGILILLLTRTTYYFLKPLGQGMISAQIIAGIIMGPSILGHDGAYAEKLFPPGGKLVLETLANVGFMLHLFLVGLQMDPRILKKAGKTAVLIGIGGFILPYGLGELAFIIIHHVMTLDRKLSVSIPFMVALNSMTSFVVVSSLLTDLNILNSELGRLATQTSMVSDLCSWFMATMMNTVGIAARDSDWMLLWSLIWLLIFLISIVFVFRPIIIWISKQTPEGERMDEVLFFIIIVMIMGCAFCAEVLGQHAALGPLVLGMALPDGPPIGTILLQKFDTMVTGLLLPIFFALSGSKTKLFSLGKGMFPFMVEFIIILGYIGKFTGTLIPAIFSGVPRWDSLCLAMIMCCKGIIEVATYSMWKDRKILSYQSYSLLLITMLIVTGVCRPIVGYLYDPASSHMSYSRKSIMYPKHDSEFRILVCIHNEHNVSTIINLLEASHATKSSPISIVALCLMELTGSSSSVLESYDSKKKLTSGVTHLGHIINAFNYYEQHNHGRVTVQHFTAIAPYSSMHTDICAIALEMRANIVIVPFHKQMAFGGTEEATATSIKTVNLNVIDKAPCSVGILVDRGHIGGHRSFVAGHSLYHIALLFLGGADDREALSYSRRMAEDPKIRLTVVCFRPWGEQAYTEETEEYLDKKLMNEFKADAVDKIVYSEVIVKDGEGTTQVIRSMEEGFDLFIVGRHHDKSPFTLGLTEWHECTELGLIGDMLAGSDFLFSVLVVQQQPFGLGAVSTGKRRGRTNPRSGQMPEQLLSCTELPPKVNSFGVWKYEKGPLKFPLPLLQMQILAILAVIHTLHFVLKHLGLPMLISEIAAGLLLGGSALGNISAYSEMFLNVESQNIIGTLSIFGYTLFMFLIGVKMDMGMISNTGKKALAVGILALLGPLIVGMAVAVICLEFWAKEATNLTYIAAVHSLTPFPVIACLLSELKILNSELGRLALSSAIVSDLFSLFLTIVSVVVRTREGAPWHTAVVTVVSPVVFVLVVVYILRPAMFWVVAQTPEGRAVKNVYIYAIILGLLFCGIFSDFFGQYVIFGAFIFGLAVPDGPPLGSALVEKLDSMVSLVLMPIFMATCAMRANVIDVFRKGDKETVANIFIILATLIAKIGACVAPLLYCKMPCNDALALSLIMSAKGTVNMATQSVLRDSGVVDDEIFGLMVIATTLNAAIVPFLVRKLYDPSRKYAGYQTRNIMHCKPNAELRILACVHEQEGVTSIINLLNASNPTRDNPISIYRTVSNHSYSENVILALNRYQRNNGGAALTHVFTAISPHKLMHEDICTLALNKLALFMIIPFHRKWNIGGSIESDEQRIRNLNCSVLDMAPCSVGILVDRPNVNLTIAHFLPMDDENTNEWENILDDEALKDIKHSNLGFEQVNYLQRVVKDGPETALIVRSMTSQYDLIIVGRRHGVESPLTSGLTEWSEFPELGALGDLLAASDLDSNASVLVVQQQRKL* 1498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8269211 8280258 - Vvi6g713 Vvi6g713 788290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g713 1497 PANTHER CATION/H(+) ANTIPORTER 4 1279 1375 - -
Vvi6g713 1497 PANTHER CATION/H(+) ANTIPORTER 4 795 1276 - -
Vvi6g713 1497 PANTHER CATION/H(+) ANTIPORTER 4 30 769 - -
Vvi6g713 1497 PANTHER CATION/H(+) ANTIPORTER 4 1376 1496 - -
Vvi6g713 1497 Pfam Sodium/hydrogen exchanger family 47 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi6g713 1497 Pfam Sodium/hydrogen exchanger family 831 1214 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi6g713 1497 CDD USP_Like 637 729 - -
Vvi6g713 1497 PANTHER CATION/H + ANTIPORTER 1376 1496 - -
Vvi6g713 1497 PANTHER CATION/H + ANTIPORTER 795 1276 - -
Vvi6g713 1497 PANTHER CATION/H + ANTIPORTER 30 769 - -
Vvi6g713 1497 PANTHER CATION/H + ANTIPORTER 1279 1375 - -
Vvi6g713 1497 Gene3D - 40 442 IPR038770 -
Vvi6g713 1497 Gene3D - 825 1227 IPR038770 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g713 Vvi8g335 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g713 - - vvi:100263928 1487.24