Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g734 ATGTGCTTTGTGGTAGCTGCCGCTATTGTGATCCCTATATCTGCACAACTCTCTCCTGATTTTTATGACAAGTTGTGCCCGCAGGCATTGCCCACCATTAGATCAATTCTCGAAAAGGCAATCTATCATGAGCCACGCCTTGGAGCATCACTGCTTCGAGTGCACTTCCATGACTGTTTTGTGAATGGTTGTGATGCATCAGTTCTGCTAGACGACACCCCCAACTTCACTGGTGAGAAGACAGCCGGGCCCAATCTCAATTCCCTTAGGGGTTTTGAAGTGATAGATGAAATCAAAGAAGCCGTTAACTCAGCTTGCTGCGGCAATGTGGTGTCATGTGCAGATATCCTAGCTGTTGCAGCTCGCGACTCTGTTGCCATTTTGGGAGGTCCATCATACCAAGTATTATTGGGCAGAAGAGATGCGAGAACAGCAAGTCTTAACGATGCAAACAGCGATATCCCACGTCCAATTTTTGACTTCCCAGCGCTTCTCTCCAACTTTCAAAATCATGGGCTAGACCTAAATGACCTTGTTCTGCTCTCAGGCGGCCACACCATTGGCCTTGCCCGGAGGAGATGA 582 48.28 MCFVVAAAIVIPISAQLSPDFYDKLCPQALPTIRSILEKAIYHEPRLGASLLRVHFHDCFVNGCDASVLLDDTPNFTGEKTAGPNLNSLRGFEVIDEIKEAVNSACCGNVVSCADILAVAARDSVAILGGPSYQVLLGRRDARTASLNDANSDIPRPIFDFPALLSNFQNHGLDLNDLVLLSGGHTIGLARRR* 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8545319 8546675 - Vvi6g734 Vvi6g734 788311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g734 193 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Vvi6g734 193 PRINTS Plant peroxidase signature 26 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 PRINTS Plant peroxidase signature 50 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 PANTHER PEROXIDASE 72-RELATED 4 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 Gene3D - 20 154 - -
Vvi6g734 193 ProSiteProfiles Plant heme peroxidase family profile. 16 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 Gene3D Peroxidase, domain 2 155 191 - -
Vvi6g734 193 PRINTS Haem peroxidase superfamily signature 48 62 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 Pfam Peroxidase 34 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g734 193 PANTHER CATIONIC PEROXIDASE 4 191 - -
Vvi6g734 193 ProSitePatterns Peroxidases active site signature. 48 59 IPR019794 GO:0004601
Vvi6g734 193 SUPERFAMILY Heme-dependent peroxidases 16 191 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g734 Vvi8g364 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g734 K00430 - vvi:100246743 381.333