Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g736 ATGGCTTCCTCTTCTTTCTCCATTGTTGTTGTGGCATTGGGTGTCCTCGCGCTCTTTGCGGGGAGCTCTTCTGCTCAACTCTCGACCAACTTTTACTCTAAAACTTGTCCTAAGGTCTTTGATACTGTGAAATCTGGAGTTCAATCGGCGGTTTCGAAAGAACGCCGCATGGGCGCTTCTCTCCTCCGTCTCTTCTTCCATGATTGCTTTGTCAATGGCTGCGATGCATCAGTCCTCCTCGACGACACCTCTTCCTTCACTGGCGAGCAGACCGCCGTCCCCAATAAGAACTCCATCAGAGGCCTAAATGTGATCGATAACATAAAGTCGCAGGTGGAGAGCGTGTGCCCTGGTGTAGTCTCCTGTGCCGATATCATAGCCATTGCTGCTCGCGACTCGGTCGTGATTCTTGGAGGGCCCGACTGGGATGTCAAGCTTGGAAGGAGAGATTCCAAAACAGCTAGCCTCTCTGGTGCCAACAACAACATCCCCCCTCCCACTTCTAGCCTCAGCAATCTCATCTCTAAGTTCCAAGCTCAGGGCCTCTCAACCCGGGACATGGTGGCTTTATCTGGAGCACATACAATAGGCCAAGCGAGATGCACCTCCTTCAGGGCCAGGATATACAACGAAACCAACATCGATAGCTCCTTCGCTAAGACAAGGCAAGCGAGCTGCCCGAGTGCTTCTGGTTCAGGAGACAACAACCTGGCACCTCTGGATCTTCAGACCCCTACCACCTTTGACAACTACTACTACAAGAACCTGATCAACCAAAAGGGTCTTCTTCACTCTGATCAAGTTCTCTACAATGGAGGTTCCACTGACTCCACAGTTAAAACCTACGTCAACAACCCAAAGACCTTCACTTCTGACTTTGTTGCCGGAATGATCAAGATGGGTGATATCACTCCACTCACTGGGTCTGAAGGGGAGATCAGGAAGAGCTGTGGGAAGGTGAATTAA 966 50.72 MASSSFSIVVVALGVLALFAGSSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETNIDSSFAKTRQASCPSASGSGDNNLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYNGGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGEIRKSCGKVN* 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8561977 8564377 + Vvi6g736 Vvi6g736 788313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g736 321 Gene3D - 30 317 - -
Vvi6g736 321 PANTHER PEROXIDASE 72-RELATED 3 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PANTHER PEROXIDASE 3 321 - -
Vvi6g736 321 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Vvi6g736 321 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Vvi6g736 321 CDD secretory_peroxidase 26 320 IPR033905 GO:0004601|GO:0042744
Vvi6g736 321 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 SUPERFAMILY Heme-dependent peroxidases 26 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi6g736 321 Gene3D Peroxidase, domain 2 164 300 - -
Vvi6g736 321 ProSiteProfiles Plant heme peroxidase family profile. 26 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g736 Vvi13g133 ECH
Vvi6g736 Vvi8g365 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g736 K00430 - vvi:100257005 628.632