Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g751 ATGTATAGAACAAAGCTTGGAGAGCTCACCAACGAAGGAAAAGATGAGTCTGGATATGCTGAAACCGATCCAACTGGTCGCTATGGTAGATTGGACGAAGTCTTGGGCAAAGGAGCAATGAAGACAGTTTACAAGGCAATAGATGAGGTCCTTGGAATGGAAGTGGCATGGAACCAAGTGAAACTCAATGAAGTTCTCCGATCACCCGATGAGTTACAGCGGCTTTACTCTGAAGTTCATCTCCTCAGCGCCCTCAATCACGATTCCATCATCCAATTCTACACTTCTTGGATTGATGTGGAACGCAAAACCTTCAACTTCATCACTGAATTCTTCACCTCAGGCACCCTCAGAGAATACAGGAAGAAGTACAAAAGGGTGGACATCCGAGCTATTAAATGCTGGGCACGGCAAATCCTCAGGGGGCTTGTTTATCTGCATGGCCATGATCCTCCAGTAATTCACAGAGACCTCAAGTGTGATAACATCTTTGTCAATGGGCATCTTGGAGAAGTTAAGATTGGCGATCTAGGCTTGGCAGCCATTCTCCGGGGCTCCCAATCAGCTCACAGTGTTATAGGAACACCGGAGTTCATGGCACCAGAGTTATATGAGGAAAACTACAATGAACTGGTTGATGTCTACTCATTTGGCATGTGTGTATTAGAAATGCTTACATCTGAGTACCCCTATAGTGAATGCTCCAACCCTGCACAAATTTACAAGAAAGTGACATCGGGAAAGCTTCCTGGAGCATTCTACCGGATTCAAGACTTGGAAGCACAGAGGTTCATTGGGAAATGCTTAGTAACTGCTTCCAAGAGACTACCTGCAAAAGAACTATTGCTTGATCCTTTTCTGGCCTCTGATGAGGCCAAACGGCTTCCTAAACCAAAGCTTGGAAGTCAGAAGCCATTTCTGAATGACATAAGAATAGAGAAACTGCGCTTGAGCGATGATAGAGTAAGGACCAACATGACAATCACAGGGACACTGAATCCTGATGATGATACCATTTTCCTTAAAGTGCAGACTGCTGATAAAGATGGGTCTGCAAGGAACATATATTTTCCCTTTGACATTGTGACTGACACTCCAATTGATGTGGCAATGGAGATGGTGAAGGAGTTGGAGATCACAGATTGGGAGCCATTTGAAATTGCAGATATGATTGATGGGGAGATATCTGCTCTAGTACCACAATGGAAGAAATGGGACATGCCACAGCAACATCACTATGCATTTGATTATCAAGAAGAAGATGAGGGACATAACCATCCATTCCGCTCTTTCTCCTCCTGTTCATCATCCCAAGCTTCGTTTCCGTGTTTGAGCACTTCTCACAGGTTGGACACAATGGCTCAAGGTGGTGATTGGCTCAAAGATGATTTGTTTGACGATACCAGCTCTGAAAGTTCTGCACACTCTGGAAAATATTCCAACTTGAATTACTTTTCTGGCAATGAACACTGTTCCGAAACAAGTACTTTAAGAAGAGAACAGCATCCTGGGGCGAAAACTCAGAAGTCTACAAGGTTTTGCCCTGAAGAGAACTCTAGCACGCGGAAGGCCCTGCCTGGAAAAAGCTACAAGCAAGGCAAGGTTTTGCAGGAGTCACAGAGAGCTCCTGGTTCTAAGGATAAGTTCGCAATGGAGACCATTAGATTAACAAGAAACCGCTCATTAGTAGATGTGCGAAGCCAGCTACTGCATAGAACATTGGTGGAGGAGGTGCACAAAAGACGGTTGTCCAAGACGGTTGGAGCTGTGGAAAACATTGGGTTTCAGGCACCCTGCAATGTCTCCGGGAAGGTATCACAGAAACCAACTGGTGCTCATTCCACAAGAACTACAAGAGATGGAAAAGGGCAAGGATCTCAAAGAAGAAGAGCTTAA 1896 44.88 MYRTKLGELTNEGKDESGYAETDPTGRYGRLDEVLGKGAMKTVYKAIDEVLGMEVAWNQVKLNEVLRSPDELQRLYSEVHLLSALNHDSIIQFYTSWIDVERKTFNFITEFFTSGTLREYRKKYKRVDIRAIKCWARQILRGLVYLHGHDPPVIHRDLKCDNIFVNGHLGEVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEENYNELVDVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFYRIQDLEAQRFIGKCLVTASKRLPAKELLLDPFLASDEAKRLPKPKLGSQKPFLNDIRIEKLRLSDDRVRTNMTITGTLNPDDDTIFLKVQTADKDGSARNIYFPFDIVTDTPIDVAMEMVKELEITDWEPFEIADMIDGEISALVPQWKKWDMPQQHHYAFDYQEEDEGHNHPFRSFSSCSSSQASFPCLSTSHRLDTMAQGGDWLKDDLFDDTSSESSAHSGKYSNLNYFSGNEHCSETSTLRREQHPGAKTQKSTRFCPEENSSTRKALPGKSYKQGKVLQESQRAPGSKDKFAMETIRLTRNRSLVDVRSQLLHRTLVEEVHKRRLSKTVGAVENIGFQAPCNVSGKVSQKPTGAHSTRTTRDGKGQGSQRRRA* 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8664970 8669192 - Vvi6g751 Vvi6g751 788328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g751 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 626 - -
Vvi6g751 631 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Vvi6g751 631 MobiDBLite consensus disorder prediction 493 547 - -
Vvi6g751 631 ProSiteProfiles Protein kinase domain profile. 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g751 631 CDD STKc_WNK 27 287 - -
Vvi6g751 631 MobiDBLite consensus disorder prediction 507 526 - -
Vvi6g751 631 Pfam Protein kinase domain 32 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g751 631 MobiDBLite consensus disorder prediction 1 25 - -
Vvi6g751 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Vvi6g751 631 SUPERFAMILY Protein kinase-like (PK-like) 30 288 IPR011009 -
Vvi6g751 631 MobiDBLite consensus disorder prediction 601 621 - -
Vvi6g751 631 MobiDBLite consensus disorder prediction 601 631 - -
Vvi6g751 631 Gene3D Transferase(Phosphotransferase) domain 1 112 295 - -
Vvi6g751 631 MobiDBLite consensus disorder prediction 8 25 - -
Vvi6g751 631 SMART serkin_6 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g751 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 1 626 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g751 Vvi8g379 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76718 PF00069 Pkinase 2.40E-46 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g751 K08867 - vvi:100255269 1269.22