Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g752 ATGGGTGATCTTAAGCTTCCCTCTCCGTTTCTGCCAAACGGCGTCGTATCGTACCGTGGCGCTTCCCGCTCCCTCTCCTCTTCTCCGCCATTGCCGGCTTCGATTGCCGGCGACTCTTGGGCCGCAGCGGAGAGGGCCACCCAGGAGATTGTGGCCAAGATGCAGCCCACTCTGGGCTCTATGCGAGAGAGGCAGGAGGTTATTGACTATGTTCAGAGGCTTATTGGGTGTTGTCTTGGATGCGAGGTGTTCCCCTATGGGTCTGTGCCTCTAAAGACCTATCTTTTAGATGGAGATATTGATTTGACTGCCCTTTGCAGTTCAAACGTTGAGGAAGCTCTGGCTAGTGATGTCCATGCTGTTCTGAAGGGAGAAGAGCAGAATGAAAATGCTGAGTTTGAAGTGAAGGACATCCAGTTTATTACTGCTGAGGTTAAGCTTGTGAAATGTCTTGTAAAAGATATTGTAATAGATATCTCCTTCAATCAGTTAGGAGGACTTTCTACACTGTGTTTTCTTGAGCAGTGGTTCATTTTGCTTACCAGCTATGGAGAAACACAAATGAAAGAAAATATCATAGAAGCTTCATTGCTGGTTTTATGGTTTCTGTATTGGCATATTTGGAGCTTGTACTGCATCTATCCCTCCTTTACATCTGTCCAGAATCATAAGAGAGAAAATCCGTGGTTCCATATGTATGGAGTTCAATTTCTTTGCAATTATTCATTCAAGCCTCTATTAAGTGTAATTGTTGACCGCCTTATTGGCAAAGATCATCTTTTCAAACGCAGCATTATCCTGATAAAATCTTGGTGCTACTATGAGAGTCGGATCCTTGGTGCCCATCATGGTCTGATTTCAACATATGCTCTGGAGATTTTGGTTCTATATATCTTCCATCTATTTCATTTATCATTAGATGGCCCTTTAGCAGTGCTTTATAGATTTTTGGATTACTTCAGCAAATTTGATTGGGATAATTACTGTATCAGTCTAAATGGTCCAGTTTGCAAATCTTCCCTGCCTGATATTGTGGCTGAACTACCAGAAAATGGGCAGGATGATTTATTGTTAAGTGAAGAATTTCTTAGAAACTGTGTGGACATGTTCTCGGTTCCATTCAGGGGGCTTGAGACAAACTCGCGGACATTTCCCCTGAAGCATCTTAATATAATTGATCCACTGAGGGAAAACAACAATCTTGGGCGCAGTGTCAATAAAGGAAATTTCTATCGAATACGTAGTGCTTTTAAATATGGGTCTCACAAGCTTGGCCAGATTCTTTCGTTACCAAGGGAAGTGATACAGGATGAGCTCAAAAATTTCTTTGCAAGCACTTTAGAGAGGCATAGAAGCAAATATATGGCTGAAATCCAAAATTCTGCTCTGACTTTTGGCTCTAGAGGGTCAAGCTCTTCATCTTCATCATCAGGCACCGAAATATGCTCTGAAGATGAAATTTTTCTAACATCACTCGATAGTGATAAGATAACTAGAATTGATGATGAAACCTCCTCAATGGGAGTGCTGTCCTCTCCTTCATTGTCGGAAATGGACAGTTCTATAGATGGGAATGCTGTTTCAGGATATTGTCTCTCAGGGGACTCCAAAGAGAGTGCAAGCTGTGGTTTTCATGATCTGAGGATTACAGAGGACATGTCTGACAGTCTGCCTCCGACTGGCAACTTGGGTAGGTCCCTTTCAGTGAAATCTCACCATGGACATCGTTTATATATCTCTAGCTTGTTTATAGAAAATGGGAGCCTGTGTCCAAAAATGGCAGAAAGCTCTGTTATTGATGATGCCAGCATTGTTCTACAGCAGGAATCCAAAGAGAACCATTTTGTGGCTAACACTTCATTCAGTTCGCATAGTTATCATGAAGGGCACAACTCTATTGGTTCTATTATCTCTAGACCAACTGCTAATATCTCAGAAAATACAGCCCTTGCTTTTAGAGGAAGGGACTTCGCTTGCAATGCTGGAAGCCTGGGATCATTGGAAACTTTGTTGGACCTCAGTGGGGATTATGACAGTCACATTAGAAGCCTGCAATATGGTCAATGTTGCTATGGCCATGCCTTACCTCCACCTCTACTGCCCAGTCCTCCTTTGTCACCTTCACAGTTGCAGATAAATACTCCATGGGACAAAGTCCGTCAGCACCTGCAGTTTACGCAGAATTTGCATTCTCAGATGGACTCAAATGGTGTTATCTTGGGAAATCATTTCCCTGTAAAGCATCCTGCACGATCTATTACTGCTTTTGGCCTGGAAGATAAGCAAAAACCTCGAGGAACTGGCACATACTTTCCCAACATGAGCCATCTTCCAAACCGGGATAGACCAGTAGGGCAGAGAAGGAATCAAGCACTAGAATCTCACAGTCAATTACACAGGCGCAAACATAGGAATGGCTTGGTTGCAGCTCAGCAAGAGATGAACTTGATTGAAGAAACCAGCCATGAGTTGTCACAGTTACAGTATCCAGTTCTAGGCCATGGGAAGTCTATCCATGCCAATGGTTCATCTCTCCCACCAAAGAGACTTGAGTTTGGGTCCTTTGGTACTATGTCATCTGGACTGCCCACACCAGATAGATGCACTAAGCCAGATTCTTCAGGCACTTTGCCTGCTTGGGGAGCAACTGCAAGTCCTGTAGGTTCAAGAATGCAGAGTCCAAAACCAGTACTGGGTAATGAAGAAAAGAGGTTTGAAGGGTTGTCATACCATCTGAAAAACGAAGACGATTTCCCCCCTTTGTCCCTCAAAATGCAGGTGGATGGATAG 2790 43.51 MGDLKLPSPFLPNGVVSYRGASRSLSSSPPLPASIAGDSWAAAERATQEIVAKMQPTLGSMRERQEVIDYVQRLIGCCLGCEVFPYGSVPLKTYLLDGDIDLTALCSSNVEEALASDVHAVLKGEEQNENAEFEVKDIQFITAEVKLVKCLVKDIVIDISFNQLGGLSTLCFLEQWFILLTSYGETQMKENIIEASLLVLWFLYWHIWSLYCIYPSFTSVQNHKRENPWFHMYGVQFLCNYSFKPLLSVIVDRLIGKDHLFKRSIILIKSWCYYESRILGAHHGLISTYALEILVLYIFHLFHLSLDGPLAVLYRFLDYFSKFDWDNYCISLNGPVCKSSLPDIVAELPENGQDDLLLSEEFLRNCVDMFSVPFRGLETNSRTFPLKHLNIIDPLRENNNLGRSVNKGNFYRIRSAFKYGSHKLGQILSLPREVIQDELKNFFASTLERHRSKYMAEIQNSALTFGSRGSSSSSSSSGTEICSEDEIFLTSLDSDKITRIDDETSSMGVLSSPSLSEMDSSIDGNAVSGYCLSGDSKESASCGFHDLRITEDMSDSLPPTGNLGRSLSVKSHHGHRLYISSLFIENGSLCPKMAESSVIDDASIVLQQESKENHFVANTSFSSHSYHEGHNSIGSIISRPTANISENTALAFRGRDFACNAGSLGSLETLLDLSGDYDSHIRSLQYGQCCYGHALPPPLLPSPPLSPSQLQINTPWDKVRQHLQFTQNLHSQMDSNGVILGNHFPVKHPARSITAFGLEDKQKPRGTGTYFPNMSHLPNRDRPVGQRRNQALESHSQLHRRKHRNGLVAAQQEMNLIEETSHELSQLQYPVLGHGKSIHANGSSLPPKRLEFGSFGTMSSGLPTPDRCTKPDSSGTLPAWGATASPVGSRMQSPKPVLGNEEKRFEGLSYHLKNEDDFPPLSLKMQVDG* 930
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8673000 8679927 - Vvi6g752 Vvi6g752 788329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g752 929 Gene3D Beta Polymerase, domain 2 43 175 IPR043519 -
Vvi6g752 929 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 251 922 - -
Vvi6g752 929 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 26 175 - -
Vvi6g752 929 MobiDBLite consensus disorder prediction 761 802 - -
Vvi6g752 929 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 251 922 - -
Vvi6g752 929 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 26 175 - -
Vvi6g752 929 SUPERFAMILY Nucleotidyltransferase 48 174 IPR043519 -
Vvi6g752 929 SUPERFAMILY PAP/OAS1 substrate-binding domain 260 430 - -
Vvi6g752 929 CDD NT_PAP_TUTase 64 167 - -
Vvi6g752 929 MobiDBLite consensus disorder prediction 781 796 - -
Vvi6g752 929 Gene3D - 238 444 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g752 Vvi8g678 ECH
Vvi6g752 Vvi8g380 ECH
Vvi6g752 Vvi13g148 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g752 - - vvi:100253523 1335.47