Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g765 ATGGACGCTAAGAAGGCAATGCCTCCTGATAAGTTGGCTGAGCTTTGGAATATTGATCCTAAGCGCGCCAAAAGGATTCTGGCAAACCGGCAATCTGCTGCTCGCTCAAAAGAGAGGAAGGCCCGTTATATATTAGAACTTGAGCGAAAAGTTCAGACCCTTCAAACAGAAGCCACCACTCTTTCTGCACAACTCACACTGTACCAGAGAGACACAACAGGTCTAAGTACTGAAAACACAGAACTTAAGCTTCGGTTACAAGCTATGGAGCAACAAGCTCAATTGCGTGATGCTCTAAATACAGCATTGAAGCAGGAAGTTGAGAGACTAAAAATTGCCACTGGGGAAATAATGAGCCCCTCTGAGTCATTTGACCTGGGAATGCAGCAAATGCTATACACCCCATCATCCTTTCTCTCACTTCCTCAACAAATTGGGCCTGCTGGCCAGCCAAACATGCAGTTGCCACCATTCCATCATTCCCATTCTAACATGTCAACTCAGTACCTGCAGCCTATAAATTCTCAACCGATCTCAGAAATTTTGCAGAATGACCCTCTTGGCCGATTACAGGGCCTTGACATCAGTAGCAGAGGCTCACATCTTGTGAAGTCTGAAGGCCCTTCCATCTCTGCCTGCGAGAGTAGCAGCACGTTTTAA 660 46.36 MDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNTALKQEVERLKIATGEIMSPSESFDLGMQQMLYTPSSFLSLPQQIGPAGQPNMQLPPFHHSHSNMSTQYLQPINSQPISEILQNDPLGRLQGLDISSRGSHLVKSEGPSISACESSSTF* 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8835673 8841008 - Vvi6g765 Vvi6g765 788342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g765 219 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 19 82 IPR004827 GO:0003700|GO:0006355
Vvi6g765 219 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 216 - -
Vvi6g765 219 MobiDBLite consensus disorder prediction 200 219 - -
Vvi6g765 219 CDD bZIP_plant_RF2 22 71 IPR044759 GO:0003700|GO:0006355
Vvi6g765 219 Gene3D - 20 73 - -
Vvi6g765 219 SUPERFAMILY Leucine zipper domain 21 72 IPR046347 GO:0003700|GO:0006355
Vvi6g765 219 PANTHER ATBZIP TRANSCRIPTION FACTOR 1 216 - -
Vvi6g765 219 SMART brlzneu 17 81 IPR004827 GO:0003700|GO:0006355
Vvi6g765 219 MobiDBLite consensus disorder prediction 146 165 - -
Vvi6g765 219 Pfam bZIP transcription factor 21 77 IPR004827 GO:0003700|GO:0006355
Vvi6g765 219 Coils Coil 37 64 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g765 Vvi13g162 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14965 PF00170 bZIP_1 4.70E-09 CL0018 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g765 - - vvi:100243248 427.943