Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g771 ATGGATCTCATACTCATAGAGAAAGCTCTGTTAGCGGTGTTCTGCGCTATAATTCTGGCCATCACCATCTCTAAGCTTCTGGGGAAGAAATTAAAGCTGCCTCCAGGTCCTCTGCCGGTGCCGGTTTTCGGGAACTGGCTGCAGGTTGGGGATGACTTGAACCACCTGAACCTCTCCGACTTAGCGAAGAAATTCGGGGACATTTTCATGCTGCGAATGGGGCAGCGGAACCTGGTGGTGGTGTCGTCGCCGGACCTGGCGAAGGACGACATGGTGTTCACGGTGTACGGTGAGCATTGGCGGAAGATGCGGCGGATCATGACCGTCCCTTTCTTCACCAACAAGGTAGTTCAGCAGTACCGCGTCGGATGGGAGGACGAGGCGGCGCGTGTGGTTGAGGACGTGAAGAAGAATCCCGAGGCCTCCACCAACGGAATCGTGCTGAGGAGACGGTTGCAGCTCATGATGTACAACAACATGTATAGAATCATGTTCGATAGAAGATTCGATAGTGAGGAGGATCCGTTGTTCGTGAAGCTCAAAGCCTTGAACGGAGAGAGGAGTAGACTGGCTCAGAGCTTCGAGTACAATTATGGAGACTTCATTCCCATTTTGAGACCATTTTTGAGAGGCTACCTGAAAATCTGCAAGGAAGTTAAGGAGAGAAGGTTGCAGCTCTTCAAGGACCATTTTCTTGAGGAGAGGAAGAAGCTGGCAAGCACAAAGAGCACAGATCACAACAGTCTGAAATGCGCCGTTGATCATATTTTGGATGCTCAGCAGAAGGGTGAGATCAACGAGGACAACGTCCTTTACATTGTGGAGAACATCAATGTTGCTGCTATTGAAACAACGTTGTGGTCAATCGAGTGGGGCATTGCAGAGCTGGTGAACCACCCTCACATCCAGAAGAAGCTCAGGGATGAGCTGAACACTGTGCTTGGACCTGGCGTCCAAGTCACCGAGCCTGATATCCAAAAGCTTCCATATCTTCAGGCTGTAATCAAAGAAACTCTCCGGCTAAGGATGGCAATTCCTCTCCTGGTCCCCCACATGAATCTGAATGATGCAAAGCTCGGTGGCTATGACATTCCTGCTGAGAGCAAAATCCTGGTGAACGCATGGTGGCTTGCTAACGACTCTTCCAAGTGGAAAAAACCAGAAGAGTTCAGGCCAGAGAGATTCCTGGAGGAGGAGTCCAAGGTTGAGGCCAATGGCAATGACTTCAGGTACCTCCCGTTCGGTGTTGGAAGAAGAAGCTGCCCTGGAATCATTCTTGCTCTGCCAATTCTTGGTATCACAATTGGACGTCTGGTTCAGAATTTTGAGCTCCTCCCTCCTCCTGGACAGGCCAAACTTGACACCACAGGAAAGGGTGGGCAGTTCAGTTTGCACATCTTGAAGCATTCCACCATTGTGGCAAGGCCAATAGAAGCTTGA 1440 50.42 MDLILIEKALLAVFCAIILAITISKLLGKKLKLPPGPLPVPVFGNWLQVGDDLNHLNLSDLAKKFGDIFMLRMGQRNLVVVSSPDLAKDDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRVGWEDEAARVVEDVKKNPEASTNGIVLRRRLQLMMYNNMYRIMFDRRFDSEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDHFLEERKKLASTKSTDHNSLKCAVDHILDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPHIQKKLRDELNTVLGPGVQVTEPDIQKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLGGYDIPAESKILVNAWWLANDSSKWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQAKLDTTGKGGQFSLHILKHSTIVARPIEA* 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8882428 8886021 - Vvi6g771 Vvi6g771 788348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g771 479 SUPERFAMILY Cytochrome P450 34 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Vvi6g771 479 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 88 477 - -
Vvi6g771 479 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PRINTS E-class P450 group I signature 155 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 Gene3D Cytochrome P450 25 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 Pfam Cytochrome P450 34 91 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 Pfam Cytochrome P450 92 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g771 479 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 89 - -
Vvi6g771 479 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 88 477 - -
Vvi6g771 479 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 89 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g771 K00487 - vvi:100253493 920.998