Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g774 ATGGGCCTAGGCCAGTTCATGGCGTACGCAAAGCCATACAATCTCAGATATTTTGGTTCAATCATGGCAGACGAAAATCAAAATGAAGTGAAGGATGAAGTGGCAGAACTTGCCCCTTTCGATCCTACTAAGAAGAAGAAGAAGAAGAAGGTTGTAATTCAGGACCCTGCAGATGATTCTGTGGATAAGTTGGCTGAAAAAACCGAAAGCTTGTCAGTTTCTGAAGGGGTTGAAAATACCTTCTCTGGTATGAAAAAGAAGAAGAAGAAACCTGTAGAAACTGATATCTTAAATGACGATGGTGGGGATGGCAAGGAAGATTTGGATGATCATAATGGTGAGGATGAAGAAGGAGAAGGCATTGTCCTACAACCACGGTATCCTTGGGAAGGAAGTGACCGAGACTACAAATATGAGGAGCTTCTTGGTAGGGTGTTTAACATTCTTCGGGAGAATAATCCAGAGCTTGCTGGAGATAGGAGGAGAACAGTTATGAGGCCCCCACAAGTCCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTGAACTTCATGGATCTGTGCAAGACGATGCATAGGCAGCCAGATCATGTCATGGCCTTCTTGCTGGCTGAACTTGGGACAAGTGGATCGCTTGATGGACAGCAAAGATTAGTTGTGAAGGGAAGATTTGCACCAAAGAATTTTGAAGGGATCTTGCGAAGATATATCAATGAGTATGTAATATGCCTTGGGTGCAAAAGTCCGGACACAATTCTTTCAAAGGAGAATCGTCTCTTCTTTCTCAGATGCGAGCAGTGCGGCTCTGGGCGATCAGTTGCTCCAATCAAGGCTGGTTTTGTGGCTCGTGTTGGTCGGCGGAATACTGGAACATGA 873 44.56 MGLGQFMAYAKPYNLRYFGSIMADENQNEVKDEVAELAPFDPTKKKKKKKVVIQDPADDSVDKLAEKTESLSVSEGVENTFSGMKKKKKKPVETDILNDDGGDGKEDLDDHNGEDEEGEGIVLQPRYPWEGSDRDYKYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEQCGSGRSVAPIKAGFVARVGRRNTGT* 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8929927 8936251 - Vvi6g774 Vvi6g774 788351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g774 290 MobiDBLite consensus disorder prediction 34 119 - -
Vvi6g774 290 MobiDBLite consensus disorder prediction 51 69 - -
Vvi6g774 290 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 22 290 - -
Vvi6g774 290 Pfam Domain found in IF2B/IF5 159 268 IPR002735 GO:0003743|GO:0006413
Vvi6g774 290 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 22 290 IPR045196 GO:0003743|GO:0006413
Vvi6g774 290 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 239 274 IPR016190 GO:0003743|GO:0006413
Vvi6g774 290 SMART eIF2Bneu4 160 269 IPR002735 GO:0003743|GO:0006413
Vvi6g774 290 MobiDBLite consensus disorder prediction 81 108 - -
Vvi6g774 290 Gene3D - 133 275 - -
Vvi6g774 290 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 135 242 IPR016189 GO:0003743|GO:0006413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g774 K03238 - vvi:100263785 525.013