Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g808 ATGGGGGTCTCAGGGAAATGGATTAAAGCATTGGTTGGTTTAAAGAAATCAGAAAAGTCGCAGTCTTCAGAGAAGGATGAAAATAGAACAGCAGCAGGTAGCAAGTTTTGGCACAGGAGAAAGCATTCTGTTGAGATTAATACTGATTTACTTCAAGTTGAGTTAGATCAGAATGCTGCTCCACCAGTGGAAGATACTGATCTCAATTCAGTCCCAGATCCTGCTGGTTCCCCTTCTGGTTCAAATCAAGCACAAGATGCAGTTCAAGTTCAGCAAAATGTGAGGGAAGAGTGGGCTGCAACATACATCCAAACAGCTTTTCGAGGATTTTTGGCTAGAAGAGCTCTACGCGCTTTGAAAGGGTTGGTAAGACTTCAAGCCCTCGTTAGGGGCCATGCTGTGCGAAAGCAAGCTGCAATAACTCTACGCTGCATGCAAGCTTTAGTGAGAGTTCAAGCTCGTGTCCGTGCAAGACGTGTTCGCTTGGCATTGGAAAGTCAAACAGCACAACAAAAACTTCAACTGCAACTAGCAAATGAGGCTCGTGTTCGAGAAATTGAGGAAGGGTGGTGCGATAGTGTAGGATCTGTTGAAGATATTCAAGCCAAATTGCTAAAAAGGCAGGAGGCAGCAGCTAAGCGAGAGAGAGCCATGGCCTATGCTCTGGCTCATCAGTGGCAGGCGGGATCAAGGCAGCAGGCTGCTCCCTCTGAGTTTGAACCAGATAAAAGCAACTGGGGTTGGAACTGGTTGGAAAGATGGATGGCTGTTCGTCCATGGGAGAATCGGTTTCTTGACATAAATCTGAGAGATGGAGTGATGATTCGTGAGAATGGTTCAACTGAGGGAAAGAATGGCTCCAAGACCCAGTCAAAATCTGCTGGAAAGAAACCCATTTCTTTAAATCTCTCAAATCAGAAAATGGGTCCATCTAATTCTGATGGGGGTAGTTCTTCTCCCACTAAATCAGCAATGTTTCAAGAGGCATCCAGCACGGTTTCAGCCAAGCCAAAGTCTAAGCCAATTCTTGAAGATCTGGCTGAAGAAGCCAACTCTAGACCTGGTGTTGGGTCTAGATCCCACAGCAATCCAAAAGAGAGATCCACACTACAAGATAAACAGGCAAAGAAGCGGTTGTCTCTGCCCAACAGCGGGATAGGTTCTGGGGCTCAAGCAACCAGGCAGCAAAGTAGAAGTGTGTTAAAAAAAGCAGCAAGTGCACAGAAGCCGATAAAGGATAATTCCAAGGTGAACATAAAGGGGGACTTGGAGACTACAAAATCTACATCGGTCAGTGATCTCTAG 1305 45.9 MGVSGKWIKALVGLKKSEKSQSSEKDENRTAAGSKFWHRRKHSVEINTDLLQVELDQNAAPPVEDTDLNSVPDPAGSPSGSNQAQDAVQVQQNVREEWAATYIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQTAQQKLQLQLANEARVREIEEGWCDSVGSVEDIQAKLLKRQEAAAKRERAMAYALAHQWQAGSRQQAAPSEFEPDKSNWGWNWLERWMAVRPWENRFLDINLRDGVMIRENGSTEGKNGSKTQSKSAGKKPISLNLSNQKMGPSNSDGGSSSPTKSAMFQEASSTVSAKPKSKPILEDLAEEANSRPGVGSRSHSNPKERSTLQDKQAKKRLSLPNSGIGSGAQATRQQSRSVLKKAASAQKPIKDNSKVNIKGDLETTKSTSVSDL* 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10154119 10173882 + Vvi6g808 Vvi6g808 788385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g808 434 MobiDBLite consensus disorder prediction 61 90 - -
Vvi6g808 434 MobiDBLite consensus disorder prediction 280 337 - -
Vvi6g808 434 SMART iq_5 118 139 IPR000048 GO:0005515
Vvi6g808 434 SMART iq_5 95 117 IPR000048 GO:0005515
Vvi6g808 434 PANTHER IQ-DOMAIN 5-RELATED 2 388 - -
Vvi6g808 434 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Vvi6g808 434 MobiDBLite consensus disorder prediction 18 38 - -
Vvi6g808 434 Gene3D - 92 144 - -
Vvi6g808 434 MobiDBLite consensus disorder prediction 72 90 - -
Vvi6g808 434 MobiDBLite consensus disorder prediction 14 38 - -
Vvi6g808 434 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Vvi6g808 434 PANTHER IQ-DOMAIN 5-RELATED 2 388 - -
Vvi6g808 434 MobiDBLite consensus disorder prediction 384 403 - -
Vvi6g808 434 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Vvi6g808 434 MobiDBLite consensus disorder prediction 277 434 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g808 - - vvi:100264099 777.704