Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g868 ATGCAGGTTTACATAGTGTATCTTGGATCCCTTCGTGAAGGGGAATCCTCACCATTGTCCCAACACCTTAGCATTCTTGAAACTGCTCTTGATGGAAGTTCTTCAAAAGACTCCTTGTTAAGAAGCTATAAAAGGAGTTTCAATGGATTTGCAGCTCAGCTCACGGAAAACCAAAGAGAAAGAGTGGCTAGCATGGAGGGAGTGGTGTCTATTTTCCCAAATGGACTTCTCCAACTTCACACAACAAGATCTTGGGACTTCATGGGATTGTCTGAAACCGTTAAACGGAATCCCACTGTTGAGAGTGATACTATTATAGGTGTTATTGACTCTGGAATCTGGCCTGAATCACAAAGCTTTAGTGATGAAGGTTTTAGTTCAATTCCAAAAAAATGGAAAGGTGTATGTCAAGGCGGCAAAAATTTCACTTGCAACAAGAAGGTAATTGGAGCTCGAACATACATTTATGATGATTCTGCAAGGGACCCTATCGGTCATGGAACCCACACAGCCTCCACAGCAGCTGGCAACAAAGTAGAAGATGTGAGCTTTTTTGAGCTGGCACAAGGAAATGCAAGAGGAGGGGTTCCTTCTGCAAGAATAGCTGTGTACAAAGTTTGTTCTGAATACGGATGCCAGAGTGCAGATATCTTGGCTGCCTTCGACGATGCCATTTCTGATGGGGTTGACATCATTACCGTATCATTAGGACCCGCTTCTGGAGCCACTCCTTTGGATGCGGACCCCATAGCAATTGGTGCTTTTCATGCTATGGTGAAAGGTATTTTAACATTGAATTCTGCAGGAAATAGTGGTCCATCACCAGGTTCAGTCGGAAGCGTTGCTCCATGGATGGTCAGTGTAGCTGCAAGCACCACTGACCGTGCATTTGTCACCAAGGTTGTTCTTGGGGATGGAAAAATAATAAATGGTCGTTCAATTAATACTTTTGCGTTGAATGGAACCAAGTTTCCCCTTGTATATGGGAAAGTTCTTCCAAATTCTAGTGTTTGTCATAACAATCCTGCCCTGGATTGTGATGTACCCTGTCTACAGAAAATTATAGCAAACGGAAATATTTTACTGTGTAGAAGCCCTGTAGTAAATGTGGCTCTAGGTTTTGGAGCCCGTGGCGTAATCAGACGAGAAGACGGTCGTTCTATATTCCCCTTGCCTGTATCAGATTTAGGGGAACAAGAATTTGCAATGGTTGAGGCCTACGCCAATTCCACCGAAAAAGCAGAAGCGGACATATTGAAAAGTGAGTCCATCAAAGATCTTTCTGCGCCTATGCTGGCTTCATTTTCATCACGAGGGCCAAGCAATATCATAGCTGAGATTATAAAGCCAGATATAAGTGCTCCCGGAGTAAATATCTTGGCGGCATTTTCCCCAATTGTTCCAATCATGAAGTACGACAAGAGGAGAGCTAAATACAGTATGCTATCAGGAACGTCCATGTCTTGCCCCCATGCTGCTGGAGCTGCTGCTTATGTTAAGACTTTCCACCCAGACTGGTCTCCTTCCGCCATCCGATCTGCTCTTATGACTACTGCCTGGCCCATGAATGCTACTGCAAATCCAGCTGCTGAATTTGGCTATGGATCTGGGCATATTAATCCAGCGCAAGCCATAGATCCTGGTCTGGTTTATGAAGCCTTTAAGGATGACTACACAAAGATGATGTGCGGAATGGGCTATGACACAAGGACAGTAAGGCTCATATCAGGAGACAACACTACCACTTGTACTACAGGTGTTACTGAAGGTGCCGTAAAGGATCTCAACTATCCTTCCATGGCATCTCCAGCTGACCAACACAAGCCTTTTAACATTAGTTTTCTGAGAACAGTTACCAATGTTGGCCAGGCCAATTCTACTTACCAAGCAAAGATCACTGCAGATCCTCTCATGAAAGTCCAAGTAAATCCTAACGTTCTCTCCTTCACCTCATTAAATGAGAAAAAATCTTTAGTGGTAACGGTTTCAGGAGAAGCATTGGATAAACAACCAAAGGTATCTGCATCGCTGGTGTGGACCGATGGCACTCATAGTAACATCTTCTCCAGAGAAGGAAATATCCAGATCATCAAGGCCTCTTCCAAAGGCCACCTCTGCAATCACTTTCACCAGAATCGTACCAGCAACAACCATACCTCTTTTCCCTTTTGTGTGTGTTTTCTGATTAATCAATCACAGGTGAGTTTTCATTTACGGGTTTGTTTGGATGGTGCGAACATCTTAGGGTTTGAAGTGTTTTGTTTTGGGGTTTCTTATATTTAG 2283 43.76 MQVYIVYLGSLREGESSPLSQHLSILETALDGSSSKDSLLRSYKRSFNGFAAQLTENQRERVASMEGVVSIFPNGLLQLHTTRSWDFMGLSETVKRNPTVESDTIIGVIDSGIWPESQSFSDEGFSSIPKKWKGVCQGGKNFTCNKKVIGARTYIYDDSARDPIGHGTHTASTAAGNKVEDVSFFELAQGNARGGVPSARIAVYKVCSEYGCQSADILAAFDDAISDGVDIITVSLGPASGATPLDADPIAIGAFHAMVKGILTLNSAGNSGPSPGSVGSVAPWMVSVAASTTDRAFVTKVVLGDGKIINGRSINTFALNGTKFPLVYGKVLPNSSVCHNNPALDCDVPCLQKIIANGNILLCRSPVVNVALGFGARGVIRREDGRSIFPLPVSDLGEQEFAMVEAYANSTEKAEADILKSESIKDLSAPMLASFSSRGPSNIIAEIIKPDISAPGVNILAAFSPIVPIMKYDKRRAKYSMLSGTSMSCPHAAGAAAYVKTFHPDWSPSAIRSALMTTAWPMNATANPAAEFGYGSGHINPAQAIDPGLVYEAFKDDYTKMMCGMGYDTRTVRLISGDNTTTCTTGVTEGAVKDLNYPSMASPADQHKPFNISFLRTVTNVGQANSTYQAKITADPLMKVQVNPNVLSFTSLNEKKSLVVTVSGEALDKQPKVSASLVWTDGTHSNIFSREGNIQIIKASSKGHLCNHFHQNRTSNNHTSFPFCVCFLINQSQVSFHLRVCLDGANILGFEVFCFGVSYI* 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12884022 12898126 + Vvi6g868 Vvi6g868 788445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g868 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 484 494 IPR023828 -
Vvi6g868 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 685 IPR045051 -
Vvi6g868 760 Gene3D - 294 425 - -
Vvi6g868 760 CDD Peptidases_S8_3 77 520 IPR034197 -
Vvi6g868 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 80 IPR037045 -
Vvi6g868 760 Gene3D Peptidase S8/S53 domain 103 558 IPR036852 GO:0004252|GO:0006508
Vvi6g868 760 Pfam Peptidase inhibitor I9 3 80 IPR010259 -
Vvi6g868 760 Pfam Subtilase family 102 535 IPR000209 GO:0006508|GO:0008236
Vvi6g868 760 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 3 685 - -
Vvi6g868 760 SUPERFAMILY Subtilisin-like 84 546 IPR036852 GO:0004252|GO:0006508
Vvi6g868 760 Pfam Fibronectin type-III domain 594 685 IPR041469 -
Vvi6g868 760 PRINTS Subtilisin serine protease family (S8) signature 101 120 IPR015500 -
Vvi6g868 760 PRINTS Subtilisin serine protease family (S8) signature 162 175 IPR015500 -
Vvi6g868 760 PRINTS Subtilisin serine protease family (S8) signature 483 499 IPR015500 -
Vvi6g868 760 Gene3D - 562 689 - -
Vvi6g868 760 ProSiteProfiles Serine proteases, subtilase domain profile. 84 545 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g868 - - vvi:100241012 1344.33