Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi6g868 | ATGCAGGTTTACATAGTGTATCTTGGATCCCTTCGTGAAGGGGAATCCTCACCATTGTCCCAACACCTTAGCATTCTTGAAACTGCTCTTGATGGAAGTTCTTCAAAAGACTCCTTGTTAAGAAGCTATAAAAGGAGTTTCAATGGATTTGCAGCTCAGCTCACGGAAAACCAAAGAGAAAGAGTGGCTAGCATGGAGGGAGTGGTGTCTATTTTCCCAAATGGACTTCTCCAACTTCACACAACAAGATCTTGGGACTTCATGGGATTGTCTGAAACCGTTAAACGGAATCCCACTGTTGAGAGTGATACTATTATAGGTGTTATTGACTCTGGAATCTGGCCTGAATCACAAAGCTTTAGTGATGAAGGTTTTAGTTCAATTCCAAAAAAATGGAAAGGTGTATGTCAAGGCGGCAAAAATTTCACTTGCAACAAGAAGGTAATTGGAGCTCGAACATACATTTATGATGATTCTGCAAGGGACCCTATCGGTCATGGAACCCACACAGCCTCCACAGCAGCTGGCAACAAAGTAGAAGATGTGAGCTTTTTTGAGCTGGCACAAGGAAATGCAAGAGGAGGGGTTCCTTCTGCAAGAATAGCTGTGTACAAAGTTTGTTCTGAATACGGATGCCAGAGTGCAGATATCTTGGCTGCCTTCGACGATGCCATTTCTGATGGGGTTGACATCATTACCGTATCATTAGGACCCGCTTCTGGAGCCACTCCTTTGGATGCGGACCCCATAGCAATTGGTGCTTTTCATGCTATGGTGAAAGGTATTTTAACATTGAATTCTGCAGGAAATAGTGGTCCATCACCAGGTTCAGTCGGAAGCGTTGCTCCATGGATGGTCAGTGTAGCTGCAAGCACCACTGACCGTGCATTTGTCACCAAGGTTGTTCTTGGGGATGGAAAAATAATAAATGGTCGTTCAATTAATACTTTTGCGTTGAATGGAACCAAGTTTCCCCTTGTATATGGGAAAGTTCTTCCAAATTCTAGTGTTTGTCATAACAATCCTGCCCTGGATTGTGATGTACCCTGTCTACAGAAAATTATAGCAAACGGAAATATTTTACTGTGTAGAAGCCCTGTAGTAAATGTGGCTCTAGGTTTTGGAGCCCGTGGCGTAATCAGACGAGAAGACGGTCGTTCTATATTCCCCTTGCCTGTATCAGATTTAGGGGAACAAGAATTTGCAATGGTTGAGGCCTACGCCAATTCCACCGAAAAAGCAGAAGCGGACATATTGAAAAGTGAGTCCATCAAAGATCTTTCTGCGCCTATGCTGGCTTCATTTTCATCACGAGGGCCAAGCAATATCATAGCTGAGATTATAAAGCCAGATATAAGTGCTCCCGGAGTAAATATCTTGGCGGCATTTTCCCCAATTGTTCCAATCATGAAGTACGACAAGAGGAGAGCTAAATACAGTATGCTATCAGGAACGTCCATGTCTTGCCCCCATGCTGCTGGAGCTGCTGCTTATGTTAAGACTTTCCACCCAGACTGGTCTCCTTCCGCCATCCGATCTGCTCTTATGACTACTGCCTGGCCCATGAATGCTACTGCAAATCCAGCTGCTGAATTTGGCTATGGATCTGGGCATATTAATCCAGCGCAAGCCATAGATCCTGGTCTGGTTTATGAAGCCTTTAAGGATGACTACACAAAGATGATGTGCGGAATGGGCTATGACACAAGGACAGTAAGGCTCATATCAGGAGACAACACTACCACTTGTACTACAGGTGTTACTGAAGGTGCCGTAAAGGATCTCAACTATCCTTCCATGGCATCTCCAGCTGACCAACACAAGCCTTTTAACATTAGTTTTCTGAGAACAGTTACCAATGTTGGCCAGGCCAATTCTACTTACCAAGCAAAGATCACTGCAGATCCTCTCATGAAAGTCCAAGTAAATCCTAACGTTCTCTCCTTCACCTCATTAAATGAGAAAAAATCTTTAGTGGTAACGGTTTCAGGAGAAGCATTGGATAAACAACCAAAGGTATCTGCATCGCTGGTGTGGACCGATGGCACTCATAGTAACATCTTCTCCAGAGAAGGAAATATCCAGATCATCAAGGCCTCTTCCAAAGGCCACCTCTGCAATCACTTTCACCAGAATCGTACCAGCAACAACCATACCTCTTTTCCCTTTTGTGTGTGTTTTCTGATTAATCAATCACAGGTGAGTTTTCATTTACGGGTTTGTTTGGATGGTGCGAACATCTTAGGGTTTGAAGTGTTTTGTTTTGGGGTTTCTTATATTTAG | 2283 | 43.76 | MQVYIVYLGSLREGESSPLSQHLSILETALDGSSSKDSLLRSYKRSFNGFAAQLTENQRERVASMEGVVSIFPNGLLQLHTTRSWDFMGLSETVKRNPTVESDTIIGVIDSGIWPESQSFSDEGFSSIPKKWKGVCQGGKNFTCNKKVIGARTYIYDDSARDPIGHGTHTASTAAGNKVEDVSFFELAQGNARGGVPSARIAVYKVCSEYGCQSADILAAFDDAISDGVDIITVSLGPASGATPLDADPIAIGAFHAMVKGILTLNSAGNSGPSPGSVGSVAPWMVSVAASTTDRAFVTKVVLGDGKIINGRSINTFALNGTKFPLVYGKVLPNSSVCHNNPALDCDVPCLQKIIANGNILLCRSPVVNVALGFGARGVIRREDGRSIFPLPVSDLGEQEFAMVEAYANSTEKAEADILKSESIKDLSAPMLASFSSRGPSNIIAEIIKPDISAPGVNILAAFSPIVPIMKYDKRRAKYSMLSGTSMSCPHAAGAAAYVKTFHPDWSPSAIRSALMTTAWPMNATANPAAEFGYGSGHINPAQAIDPGLVYEAFKDDYTKMMCGMGYDTRTVRLISGDNTTTCTTGVTEGAVKDLNYPSMASPADQHKPFNISFLRTVTNVGQANSTYQAKITADPLMKVQVNPNVLSFTSLNEKKSLVVTVSGEALDKQPKVSASLVWTDGTHSNIFSREGNIQIIKASSKGHLCNHFHQNRTSNNHTSFPFCVCFLINQSQVSFHLRVCLDGANILGFEVFCFGVSYI* | 761 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 12884022 | 12898126 | + | Vvi6g868 | Vvi6g868 | 788445 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi6g868 | 760 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 484 | 494 | IPR023828 | - | |
Vvi6g868 | 760 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 3 | 685 | IPR045051 | - | |
Vvi6g868 | 760 | Gene3D | - | 294 | 425 | - | - | |
Vvi6g868 | 760 | CDD | Peptidases_S8_3 | 77 | 520 | IPR034197 | - | |
Vvi6g868 | 760 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 80 | IPR037045 | - | |
Vvi6g868 | 760 | Gene3D | Peptidase S8/S53 domain | 103 | 558 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi6g868 | 760 | Pfam | Peptidase inhibitor I9 | 3 | 80 | IPR010259 | - | |
Vvi6g868 | 760 | Pfam | Subtilase family | 102 | 535 | IPR000209 | GO:0006508|GO:0008236 | |
Vvi6g868 | 760 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT4.3 | 3 | 685 | - | - | |
Vvi6g868 | 760 | SUPERFAMILY | Subtilisin-like | 84 | 546 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi6g868 | 760 | Pfam | Fibronectin type-III domain | 594 | 685 | IPR041469 | - | |
Vvi6g868 | 760 | PRINTS | Subtilisin serine protease family (S8) signature | 101 | 120 | IPR015500 | - | |
Vvi6g868 | 760 | PRINTS | Subtilisin serine protease family (S8) signature | 162 | 175 | IPR015500 | - | |
Vvi6g868 | 760 | PRINTS | Subtilisin serine protease family (S8) signature | 483 | 499 | IPR015500 | - | |
Vvi6g868 | 760 | Gene3D | - | 562 | 689 | - | - | |
Vvi6g868 | 760 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 84 | 545 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi6g868 | - | - | vvi:100241012 | 1344.33 |