Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g888 ATGGCCGAAGTCATCAACATGCCCCTCGACTCCCTCGACCGCCGCGACGGCAACGATAAATCAGCCGAAGAGCAGTCCCAGTCTCAGTCACCGTCACCGCCACCGCCACCTCCACCTCCGTCGTCGAGGAGACGCGACAGAAGAGACGACAGAGAACTCGATCGCCCTCCCAACCGACGCGCTGACTATTACGATCGGAACCGAAGCTCGCCGCCGAGGGAGAGGGATAGGGACTACAAGCGCCGGAGTAGCCCTAGCCCTCCTCCGCCATACCGCGACCGTCGCCACTCCCCTCCGCGGAGGTCGCCGCCGCTTCAGCCCTATAAGAGGTCCCGGAGAGATGATGCAGGCTATGATGGGAGGCGCGGGAGTCCCAGGGGAGGGTTTGGACCTGGAGATAGAAGGTTTGGGTATGATTATGCTAGTGGATATGAGCGTGAGATGGGGCCCAGACCTGGATATGCTGATGAAAGGCCTCATGGTCGTTATGTTGGTCGCCCATATCAAGTTGGCCCATTTGATTGGGATTCAGTTCGCAGTTATGGTGATGTTTCCAACATGGGGAATACCCAAAGAGAAGGCTTGATGTCATATAAGCAATTCATTCAGGAGCTTGAAGATGATATACTACCAGCTGAAGCTGAGCGTAGATATCAAGAATACAAGTCAGAGTACATTTCAACTCAGAAGCGGTCTTTTTTTGATTCCCATAAAGATGAGGAATGGTTGAAAGACAAATATCATCCAACAAACTTACTTAGTGTCATAGAAAGGAGGAATGAAGTTGCAAGGAAAACTGCGAAAGATTTTTTGCTTGATTTGCAAAGTGGAACACTTGACTTAGGACCTGGTGTCAATGCATCATCTTTAAACAAATCAGGACAGACTAGTGATCCAAACTCTGATGAAGAAACAGAAATGGGTGGCAAAAGAAGACGGCATGGTAGGGGACCAACTAAAGAAACTGATCTTCTTTCTGTTGCTCCCAAGGCTCATCCAGTCAGTTCTGAACCCAGACGAATCCAAGTTGACATTGAACAAGCTCAGGCCCTTGTACGTAAACTTGATTCTGAGAAAGGAATTGAGGAGAATATATTATGTAGAGCAGATAATGACAAATTGAACCGGGAGAAATCTCATGGTGGTTCCATTGGCCCTGTTATAATTATACGAGGTTTGACCTCTGTCAAGGGCCTTGAGGGCATAGAGTTGTTGGACACTCTGATTACATATCTTTGGCGAATCCATGGCTTGGATTATTATGGAATGCTAGAAACAAATGAAGCTAAGGGTCTCCGGCATGTTAGAGTGGAGGGCAAGAGTTCTGATTTAACAAGTAATGGGGTTGAGTGGGAAAAGAAGTTTGACTCACATTGGCAAGAGAGGTTGAGGAGTCAGGATCCATTGGAAATAATGACTGCTAAGGAAAAGATAGATGCTACTGCCATTGAATCTTTGGATCCCTATGTCCGAAAAATTAGGGATGAGAAGTATGGGTGGAAGTATGGTTGTGGGGCCAAAGGTTGTACAAAGCTCTTCCATGCTGCTGAATTTGTACACAAGCATCTAAAATTGAAACATCCAGAACTTGTGATGGAGCTGACTTCTAAAGTGCGTGAAGATCTGTATTTCCTGAACTATATGAGTGATGCAGATGCGCCTGGTGGGACACCTGTTATGCAGCAATCTCTACTGAAGGACAAGACACAGAAACGCAGGCTAGGTCCAGATAATCGATTGAAAGACAATCGTAGGGAACGTGAAAATCGAGCTAATGGCAGTGAAAGATATGATAGGTCTGATAACCATCAGTCAAATGATTTCCAGCCCAATGACGGTCCAGATGGGGGGAATCCTGGTGAAGGAATGTTTGACACTTTTGGTGGTCAAGGCATGCATGTTGCTCCTCCTTTTCCCTCAGATATGCCCCCTCCACCAGTATTGATGCCTGTTCCTGGTGCTGGTCCTTTGGGACCTTTTGTTCCTGCTCCACCTGAAGTTGCAATGCGTATGCTGCGAGAGCAGGGCGGGCCATCCCCTTTTGAAGGTGGGGGGAGGAATGGGAGGTCTGGGCCCCAGTTAAGTGGGCCAGCCCCAGTTCTTGCTTTATCTCCAGGTTTAAGACAAGATCCTCGGCGTCTACGAAGTTACCAGGACCTTGATGCCCCAGAGGATGAAGTCACTGTGATAGATTACAGGAGTTTGTAG 2208 48.05 MAEVINMPLDSLDRRDGNDKSAEEQSQSQSPSPPPPPPPPSSRRRDRRDDRELDRPPNRRADYYDRNRSSPPRERDRDYKRRSSPSPPPPYRDRRHSPPRRSPPLQPYKRSRRDDAGYDGRRGSPRGGFGPGDRRFGYDYASGYEREMGPRPGYADERPHGRYVGRPYQVGPFDWDSVRSYGDVSNMGNTQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRSFFDSHKDEEWLKDKYHPTNLLSVIERRNEVARKTAKDFLLDLQSGTLDLGPGVNASSLNKSGQTSDPNSDEETEMGGKRRRHGRGPTKETDLLSVAPKAHPVSSEPRRIQVDIEQAQALVRKLDSEKGIEENILCRADNDKLNREKSHGGSIGPVIIIRGLTSVKGLEGIELLDTLITYLWRIHGLDYYGMLETNEAKGLRHVRVEGKSSDLTSNGVEWEKKFDSHWQERLRSQDPLEIMTAKEKIDATAIESLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMELTSKVREDLYFLNYMSDADAPGGTPVMQQSLLKDKTQKRRLGPDNRLKDNRRERENRANGSERYDRSDNHQSNDFQPNDGPDGGNPGEGMFDTFGGQGMHVAPPFPSDMPPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPSPFEGGGRNGRSGPQLSGPAPVLALSPGLRQDPRRLRSYQDLDAPEDEVTVIDYRSL* 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13426164 13465008 - Vvi6g888 Vvi6g888 788465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g888 735 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 735 - -
Vvi6g888 735 MobiDBLite consensus disorder prediction 555 640 - -
Vvi6g888 735 MobiDBLite consensus disorder prediction 303 320 - -
Vvi6g888 735 Pfam Arsenite-resistance protein 2 436 640 IPR007042 -
Vvi6g888 735 MobiDBLite consensus disorder prediction 283 302 - -
Vvi6g888 735 MobiDBLite consensus disorder prediction 1 166 - -
Vvi6g888 735 MobiDBLite consensus disorder prediction 41 100 - -
Vvi6g888 735 MobiDBLite consensus disorder prediction 283 339 - -
Vvi6g888 735 MobiDBLite consensus disorder prediction 674 711 - -
Vvi6g888 735 MobiDBLite consensus disorder prediction 566 605 - -
Vvi6g888 735 MobiDBLite consensus disorder prediction 107 121 - -
Vvi6g888 735 ProSitePatterns Zinc finger C2H2 type domain signature. 504 527 IPR013087 -
Vvi6g888 735 Pfam SERRATE/Ars2, N-terminal domain 199 280 IPR021933 -
Vvi6g888 735 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 735 IPR039727 GO:0006397
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g888 Vvi13g857 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g888 - - vvi:100254817 1312.36