Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g897 ATGGAACTTCTGCACTCACACAGAGTGGAGGTATTGAGCATAGCCGTTGCTCTTGCAGCCATTGGCGCCGGAACCGCCTATTATTTCTATTTCATCAAAAAACCTAAAGGTTGCTTGGATCCTGAAAACTTCAAGGAGTTCAAACTTATAAAACGCACCCAGCTCAGCCATAATGTGGCTAAATTTATATTTGCTCTTCCAACACCAACTTCAGTGTTGGGACTTCCAATTGGACAACATATGAGTTGCAAGGGAAAGGATAGTCTTGGTGAAGATGTTGTTAAACCATATACTCCAACCACTTTAGATTCAGATCTTGGATACTTTGAACTCGTTATAAAGATGTATCCACAAGGAAGGATGTCCCATCATTTTCGGGAGATGTGTGAAGGTGATTACCTGGCTGTGAAGGGACCTAAGGGGCGCTTCAAGTATCAGCCTGGCCAAGTTATAGCTTTTGGGATGCTTGCTGGAGGCACTGGCATCACTCCAATGTTCCAGGTCACTAGAGCCATATTAGAAAACCCAAGTGACAATACCAAGGTGCATCTTATTTATGCCAATGTCACATATGAGGACATTCTTTTAAAGGAAGAGCTGGATAATTTTGCTGCTAACTTTCCAAACCGCTTCACTGTCTATTATGTTCTGAATCAGCCACCTGAAGGATGGAATGGTGGTGTTGGGTTCGTGTCAAAGGAAATGATTCAAACCCACTGCCCACCTCCAGCAACCAATATTCAGATATTGAGGTGCGGGCCACCGCCCATGAACAAGGCCATGGCAGGTCACCTTGAGGCTCTTGGATACACTTCCCAAATGCAGTTCAAGTTCTGA 837 44.32 MELLHSHRVEVLSIAVALAAIGAGTAYYFYFIKKPKGCLDPENFKEFKLIKRTQLSHNVAKFIFALPTPTSVLGLPIGQHMSCKGKDSLGEDVVKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMCEGDYLAVKGPKGRFKYQPGQVIAFGMLAGGTGITPMFQVTRAILENPSDNTKVHLIYANVTYEDILLKEELDNFAANFPNRFTVYYVLNQPPEGWNGGVGFVSKEMIQTHCPPPATNIQILRCGPPPMNKAMAGHLEALGYTSQMQFKF* 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13684773 13698955 + Vvi6g897 Vvi6g897 788474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g897 278 CDD cyt_b5_reduct_like 47 278 - -
Vvi6g897 278 Gene3D Translation factors 37 136 - -
Vvi6g897 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 278 - -
Vvi6g897 278 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 272 IPR039261 -
Vvi6g897 278 SUPERFAMILY Riboflavin synthase domain-like 38 147 IPR017938 -
Vvi6g897 278 Pfam Oxidoreductase NAD-binding domain 155 261 IPR001433 GO:0016491
Vvi6g897 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 154 173 IPR001709 GO:0016491
Vvi6g897 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 192 203 IPR001709 GO:0016491
Vvi6g897 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 248 256 IPR001709 GO:0016491
Vvi6g897 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 278 IPR001834 GO:0016491
Vvi6g897 278 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Vvi6g897 278 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Vvi6g897 278 Gene3D - 137 278 IPR039261 -
Vvi6g897 278 PRINTS Cytochrome B5 reductase signature 73 84 - -
Vvi6g897 278 PRINTS Cytochrome B5 reductase signature 95 102 - -
Vvi6g897 278 PRINTS Cytochrome B5 reductase signature 131 145 - -
Vvi6g897 278 PRINTS Cytochrome B5 reductase signature 154 173 - -
Vvi6g897 278 PRINTS Cytochrome B5 reductase signature 192 203 - -
Vvi6g897 278 PRINTS Cytochrome B5 reductase signature 248 256 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g897 Vvi8g84 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g897 K00326 - vvi:100247986 561.992