Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g928 ATGACGTTCCAAAAGAGCCCAACTATTCAGTCCCAGAGAGAGAGAGAGAAAAGAGAGGTTTTGGGTTCTGATCGGTGGTCTTGGTGGCGAGGATCGGAGATAGCCCACCACCAAGAATCATCTGACATGGCTTCCAGAGTTGTTCCTGTTCCAAACCAACCAAGAGGAGGAAAGCAGAAGAATGCCCCAGAAAAGGCTAGAAACCGGCAAGCTCTCAGAGAAATCGGAAATCTTATGAATGATACTATTCCAGCAGGGGAAGGGACATTCAATCCACAGATTTCTCGCCCCCTTACAAGGAGCTTTTGTGCACAATTACCGGAAAATGGGAGAGCACAGAAACCCATTGCAGAAGTTGTTTCTGTTCATGGATTTGCCCCTGGAAAAGCTCGAAAGAAGCCGAAACCTCAGACTGTGGTGACCATTAGCCCAGATGAAAATGATAAGAGTAAACCTTCAACACAAGGGTCCTTAACTAAGAAGGTCAAGACCCTCTCTTCAATCCTCACTACTCAAAGCAAGATGGCTGCATGTCGACTCACTGATAGGCCGAGGGTTCCAATAATAAACATTGATGCAGACGATGTTGATAATGAACTTGCTGCTGTTGAATATGTTGATGACATCTATCAGTTCTACAAGATGACAGAAGATGAGAATCGAACGATACATTATATGGATTTGCAGACCGATATTAATTCCAAGATGAGAGCAATCCTAATAGATTGGCTGGTAGAAGTTCATAGAAAGCTTGAACTTATGCCTGAAACGCTTTATCTTACCATAAACATTATTGATCGATACCTGTCGACAAAAATTGTATCTAGGAGCGAGCTTCAGTTAGTTGGCATCACTTCAATGCTGATTGCTTGCAAATATGAAGAAATTTGGGCACCAGAGGTGAATGACTTTGTGTGCATATCAGATAATGCCTATGCCAGGGAACAGATACTCCAAATGGAGAAATCAATCTTGACAAAGTTGGAATGGTACTTAACAGTTCCTACACCATATGTCTTCCTAGTTCGGTACATCAAAGCTTCTGTTGCACCGGATCAAGAGATGGAAGAGATGGTGTTTTTCCTAACTGAACTGGGTCTGATGAACTATTCTACAATATTGTACTCCCCATCGATGCTTGCTGCTTCAGCAGTATATGCGGCTCGTTGCACCCTCCGCAGGATCCCTCTCTGGAGTGCAACTCTAAAGCACTACACGGGCTACACTCAAGACCAACTAATGGACTGTGCGAAGCTCCTGGTTAGCTTTCACTTGGGAGCTGCAGAGAACAAGCTCAAAGCAGTCTATCAGAAATTTTCAGAACTTGAAAGGGGTGCCGTTGCCCATGTCTCTCCTGCCAAAAATCTTTCAGCTGGCGCCTAG 1383 44.25 MTFQKSPTIQSQREREKREVLGSDRWSWWRGSEIAHHQESSDMASRVVPVPNQPRGGKQKNAPEKARNRQALREIGNLMNDTIPAGEGTFNPQISRPLTRSFCAQLPENGRAQKPIAEVVSVHGFAPGKARKKPKPQTVVTISPDENDKSKPSTQGSLTKKVKTLSSILTTQSKMAACRLTDRPRVPIINIDADDVDNELAAVEYVDDIYQFYKMTEDENRTIHYMDLQTDINSKMRAILIDWLVEVHRKLELMPETLYLTINIIDRYLSTKIVSRSELQLVGITSMLIACKYEEIWAPEVNDFVCISDNAYAREQILQMEKSILTKLEWYLTVPTPYVFLVRYIKASVAPDQEMEEMVFFLTELGLMNYSTILYSPSMLAASAVYAARCTLRRIPLWSATLKHYTGYTQDQLMDCAKLLVSFHLGAAENKLKAVYQKFSELERGAVAHVSPAKNLSAGA* 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14388027 14390287 - Vvi6g928 Vvi6g928 788505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g928 460 MobiDBLite consensus disorder prediction 36 67 - -
Vvi6g928 460 Gene3D - 222 333 - -
Vvi6g928 460 ProSitePatterns Cyclins signature. 237 268 IPR006671 -
Vvi6g928 460 SUPERFAMILY Cyclin-like 336 455 IPR036915 -
Vvi6g928 460 MobiDBLite consensus disorder prediction 140 159 - -
Vvi6g928 460 Pfam Cyclin, C-terminal domain 335 451 IPR004367 -
Vvi6g928 460 Pfam Cyclin, N-terminal domain 208 332 IPR006671 -
Vvi6g928 460 Gene3D - 208 448 - -
Vvi6g928 460 PANTHER CYCLINS 60 455 IPR039361 -
Vvi6g928 460 SMART cyclin_7 339 422 IPR013763 -
Vvi6g928 460 SMART cyclin_7 242 326 IPR013763 -
Vvi6g928 460 SUPERFAMILY Cyclin-like 197 332 IPR036915 -
Vvi6g928 460 CDD CYCLIN 236 325 IPR013763 -
Vvi6g928 460 SMART Cyclin_C_2 335 453 IPR004367 -
Vvi6g928 460 CDD CYCLIN 333 421 IPR013763 -
Vvi6g928 460 PANTHER CYCLIN-B1-4 60 455 - -
Vvi6g928 460 MobiDBLite consensus disorder prediction 1 21 - -
Vvi6g928 460 PIRSF Cyclin_A_B_D_E 31 460 IPR039361 -
Vvi6g928 460 MobiDBLite consensus disorder prediction 127 159 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g928 K21777 - vvi:100254743 828.935