Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi6g949 | ATGGCCATCACCTTCTCGGATCTACACACTGAGGCTGGTCTCAAGTCTCTGGACGAATTCCTCTCCGGAAAAGCCTACATCTCTGGGGGTCATCTGACGAAGGATGATGTAAAGGTTTACGCCGCGGTTCTGGAGAAACCCGGAAGTCACTTCCCCAATGCAAGCAAGTGGTACAGCTGTGTTTCTTCGCATCTCGCCAAAAGCTTCCCTGGAAAAGCTGTTGGGGTGAGTTTAGGCTGCCAAGCTGCTCCTGTTGAAGCTGCTCCCAAGGAAGTGAAGGAGGCTGCTCCTGCTGGAGATGATGACGATGACCTTGATCTCTTTGGTGATGAGACAGAGGAGGAGAAGAAGGCAGCAGAAGAGAGGGAGGCATCTGTTAAGGCATCCTCAAAGAAGAAAGAGAGTGGAAAATCGTCTGTTCTTTTGGATGTGAAACCTTGGGATGATGAGACAGACATGAAGAAGCTGGAAGAGGCTGTTCGCAGTATTGAGATGCCAGGCCTCTTGTGGGGAGCATCAAAATTGGCTCCAGTTGGTTATGGGATAAAGAAATTGCAGATCATGATGACCATTGTGGATGACCTTGTCTCTGTGGATTCCGTTATAGAAGAGCATCTCACAGTTGAACCCATAAACGACCTAATATTGGTGAGAGATGAAGGGCTACACTCTCTTTATGGAGGGGTTAAGGCTTATTCATTGAAACCTTTTTTTTTTTATTCCATTTACATATTTACTAATCAACAACATAGAGTATTTTAA | 762 | 46.06 | MAITFSDLHTEAGLKSLDEFLSGKAYISGGHLTKDDVKVYAAVLEKPGSHFPNASKWYSCVSSHLAKSFPGKAVGVSLGCQAAPVEAAPKEVKEAAPAGDDDDDLDLFGDETEEEKKAAEEREASVKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLAPVGYGIKKLQIMMTIVDDLVSVDSVIEEHLTVEPINDLILVRDEGLHSLYGGVKAYSLKPFFFYSIYIFTNQQHRVF* | 254 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 14817246 | 14821503 | - | Vvi6g949 | Vvi6g949 | 788526 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi6g949 | 253 | SMART | EF1_GNE_2 | 137 | 215 | IPR014038 | GO:0003746|GO:0006414 | |
Vvi6g949 | 253 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 101 | 109 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Vvi6g949 | 253 | CDD | EF1B | 140 | 204 | IPR014038 | GO:0003746|GO:0006414 | |
Vvi6g949 | 253 | Gene3D | - | 130 | 217 | IPR014717 | - | |
Vvi6g949 | 253 | PANTHER | ELONGATION FACTOR 1-BETA 2 | 1 | 216 | - | - | |
Vvi6g949 | 253 | SUPERFAMILY | GST C-terminal domain-like | 10 | 65 | IPR036282 | - | |
Vvi6g949 | 253 | SUPERFAMILY | eEF-1beta-like | 134 | 211 | IPR036219 | - | |
Vvi6g949 | 253 | Pfam | EF-1 guanine nucleotide exchange domain | 139 | 214 | IPR014038 | GO:0003746|GO:0006414 | |
Vvi6g949 | 253 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 1 | 216 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi6g949 | K03232 | - | vvi:100261522 | 344.354 |