Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g949 ATGGCCATCACCTTCTCGGATCTACACACTGAGGCTGGTCTCAAGTCTCTGGACGAATTCCTCTCCGGAAAAGCCTACATCTCTGGGGGTCATCTGACGAAGGATGATGTAAAGGTTTACGCCGCGGTTCTGGAGAAACCCGGAAGTCACTTCCCCAATGCAAGCAAGTGGTACAGCTGTGTTTCTTCGCATCTCGCCAAAAGCTTCCCTGGAAAAGCTGTTGGGGTGAGTTTAGGCTGCCAAGCTGCTCCTGTTGAAGCTGCTCCCAAGGAAGTGAAGGAGGCTGCTCCTGCTGGAGATGATGACGATGACCTTGATCTCTTTGGTGATGAGACAGAGGAGGAGAAGAAGGCAGCAGAAGAGAGGGAGGCATCTGTTAAGGCATCCTCAAAGAAGAAAGAGAGTGGAAAATCGTCTGTTCTTTTGGATGTGAAACCTTGGGATGATGAGACAGACATGAAGAAGCTGGAAGAGGCTGTTCGCAGTATTGAGATGCCAGGCCTCTTGTGGGGAGCATCAAAATTGGCTCCAGTTGGTTATGGGATAAAGAAATTGCAGATCATGATGACCATTGTGGATGACCTTGTCTCTGTGGATTCCGTTATAGAAGAGCATCTCACAGTTGAACCCATAAACGACCTAATATTGGTGAGAGATGAAGGGCTACACTCTCTTTATGGAGGGGTTAAGGCTTATTCATTGAAACCTTTTTTTTTTTATTCCATTTACATATTTACTAATCAACAACATAGAGTATTTTAA 762 46.06 MAITFSDLHTEAGLKSLDEFLSGKAYISGGHLTKDDVKVYAAVLEKPGSHFPNASKWYSCVSSHLAKSFPGKAVGVSLGCQAAPVEAAPKEVKEAAPAGDDDDDLDLFGDETEEEKKAAEEREASVKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLAPVGYGIKKLQIMMTIVDDLVSVDSVIEEHLTVEPINDLILVRDEGLHSLYGGVKAYSLKPFFFYSIYIFTNQQHRVF* 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14817246 14821503 - Vvi6g949 Vvi6g949 788526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g949 253 SMART EF1_GNE_2 137 215 IPR014038 GO:0003746|GO:0006414
Vvi6g949 253 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 101 109 IPR001326 GO:0003746|GO:0005853|GO:0006414
Vvi6g949 253 CDD EF1B 140 204 IPR014038 GO:0003746|GO:0006414
Vvi6g949 253 Gene3D - 130 217 IPR014717 -
Vvi6g949 253 PANTHER ELONGATION FACTOR 1-BETA 2 1 216 - -
Vvi6g949 253 SUPERFAMILY GST C-terminal domain-like 10 65 IPR036282 -
Vvi6g949 253 SUPERFAMILY eEF-1beta-like 134 211 IPR036219 -
Vvi6g949 253 Pfam EF-1 guanine nucleotide exchange domain 139 214 IPR014038 GO:0003746|GO:0006414
Vvi6g949 253 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 216 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g949 K03232 - vvi:100261522 344.354