Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g956 ATGTTGAGATCAGGCTCTGCGTTTCTTCTTCTTCTTCTTGTATTTGTCTCTTTTTCAGGATATGTAGAAGCTTACAAGAACTACACAGTGGGTGACTCCTTGGGATGGTACGATAACCTCCATGAGCCTAGTGTCAATTACCAGAAATGGGTTGCTGGCAAGAACTTCAGCTTGGGTGATTTCCTCATTTTCAACACCGATAATAACCATTCAGTGGTCCAAACCTACAATTTCACGACCTACAAGCATTGCGATTACGAGAACGCCCTAGAAAACGACACGTACCAGTGGTCGGCCACCGATCCCTCCGCCACCAACCCCGTGGCTGTGACGGTGCCGGTCCCCCTGATGAAGGAGGGAATGACCTATTTCTTTTCCAGTGACTACGACGGTTGGCAATGCAAGCATGGGCAGCACTTCAAGCTGAACGTGAGTCATGGGCAAGGCCTGCCTCCCAGCCTTAAAGACCCAGCAGATGAGGCCCCTGGTCCAGTGGCCCCTGATTCTGGAGATGAAGGAGACTCCGCCCCTGACACTGTGGTTCCGGCCAACTTCAATGACCCCAAACAGGAAAATGATACTGACAACACATCAGGGTCTGCTCCTTTGCTGCCATCGTTCTTACACCAGTTGGATTACAAATTCAGTGGAATTTTGGCTTTGTTAGGTGTTGTTTGTATTTTTTGA 687 49.05 MLRSGSAFLLLLLVFVSFSGYVEAYKNYTVGDSLGWYDNLHEPSVNYQKWVAGKNFSLGDFLIFNTDNNHSVVQTYNFTTYKHCDYENALENDTYQWSATDPSATNPVAVTVPVPLMKEGMTYFFSSDYDGWQCKHGQHFKLNVSHGQGLPPSLKDPADEAPGPVAPDSGDEGDSAPDTVVPANFNDPKQENDTDNTSGSAPLLPSFLHQLDYKFSGILALLGVVCIF* 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15071171 15072602 + Vvi6g956 Vvi6g956 788533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g956 228 Pfam Plastocyanin-like domain 39 138 IPR003245 GO:0009055
Vvi6g956 228 SUPERFAMILY Cupredoxins 26 144 IPR008972 -
Vvi6g956 228 PANTHER BLUE COPPER PROTEIN 4 164 IPR039391 GO:0009055
Vvi6g956 228 Gene3D - 25 149 IPR008972 -
Vvi6g956 228 MobiDBLite consensus disorder prediction 146 198 - -
Vvi6g956 228 ProSiteProfiles Phytocyanin domain profile. 26 146 IPR003245 GO:0009055
Vvi6g956 228 PANTHER BNAA08G26900D PROTEIN 4 164 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g956 - - vvi:100244402 468.774