Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1000 ATGGACAAGTTTCAGAGCCATGGAGTCATTGTCCGCCTGCTACATCTTCTTCTCCCCCTCCAACTCTTATCCCTTCAATCTCTTTCTTTATCTTACACTCCTCCAAGTAAGTACTTCATCAACTGTGGGTCACAGAACAATACCAACCATACTGGCAGGACCTTCGTTGGGGACGTGAGTTCTGACTCCTCTTTCACCTTATCTCCGAAGCGGGACGACCCTGTTGTAGACAGCAGCCCTTCTCCGACTACATCTCAACTCTATCAAACAGCTAGGATTTTCAAAGGGTCGTCTTCATATGTGTTTCACATCGACCAAAATGGCACTTATTTGGTACGCCTCCATTTCTTCCCCTTTTCTTCCCCAACTGATCTCTCGACTGCTCTTTTCGATGTTTCGGTTTCTGGGCTACCCGGGTTGCTTCAGAATTTCTCTGTGCAAAACACCAGCAACCTTCCTCTGATAAAGGAATTCTTACTCACAATTAATATCAGCAAATTCACTGTGAAATTTGAACCTTCTCAAGAGTCGTCCTTCGCATTTGTAAATGCAATAGAAGTCTTCATTGCTCCTGATAGCTTTATCCCTGATTCTGCTCTACTAGTTACCCGAAAAGGAAGTAAAAGTAGTAGTTACAAGGGTCTGTTATCTCGGGTTCTCCAAAAAATTCACAGGGTCAATGTTGGGGGAAGTGAAATTGAACCCGGTTCAGATACTCTATGGAGAAACTGGGTTCCAGATGACACTTTTCTTTTCAATAGGAGCACTGCAAGAAATAAATCTTATGATCAGCCGATTGAGTACCAGGAAGGCCAGAGTGAATATAATAACAGCGATAGATATATTGCCCCGGAGAATGTTTATTTGACTGCCAAAGAAATGAATACAAATGAGGGAGACCAGTTGCAATCCTTCAACATCAGTTGGGGTTTTAATGTGACTAAGAATGCTACACACCTTCTTCGGGTTCACTTCTGCGACATCACTAGTGCCTCGCTATCACTAAGTCCATGGATCAATCTCTATATCAATAGCATCTTCAGTCGGAACATAAAGATTATCACCTTGGCAGCCCCTTTTTACCTTGATTTTGTAGTTGTTTCAGATAATTCCGGACTTCTTAATATCAGTATAGGGCCTCATAGGGATTCTCCAGTAAACAATTCCTTTCTCAATGGCCTGGAGATTATGGAAATCATGCAGGAATTGGGTTGGGTTTCAATCGAAAATGAATCTAAGAAGAAATATATTCCTCTCCTAGTTGGTTCAGTTGTTGGAGGTTTGGCTCTTGTCTGCCTTGTGGTAGTTGTGCTCTTGTTGCAATCAAAATGCAGGAAGGGAAAGCCTACTCAAGCTACGGATTGGTTGCCAATTACTGTTGATAGGGGACTGAGTTCCCACGGCAGGCTACATGAGGCAACCAATCATAGCTCCCCTGTTCCATATTTAAATCTGGGATTAAAGATACCTTTTGCGGAAGTTCGGTCAGCAACAAAAAACTTCAGCAGCAAGCTGCTGGTAGGCAAGGGTGGATTTGGCAAAGTCTACCAAGGAACTCTCAGGAATGGCATGAAAGTGGCAGTGAAGAGAAGTCAGCCAGGACATGGCCAAGGCCTGCCTGAATTCCAGACTGAGATATTGGTGTTATCCAAAATTCACCATCGCCATCTGGTTTCCCTGGTTGGGTATTGTGACGAAAGGAATGAAATGATTCTGGTTTATGAATTTATGCAGAAGGGCACTCTGAGAAGTCATCTTTATGATTCAGATTTGCCTTGTTTGTCTTGGAAGCAAAGGCTGGAAATTTGCATTGGTGCAGCAAGGGGACTTCACTACCTCCACACAGGTTCAGAAGGGGGAATCATTCACCGTGATATTAAGTCCACAAACATCTTGCTTGACGACAACTTTGTTGCTAAAGTTGCTGATTTTGGATTATCAAGATCAGGTCTTCCTCATCAAACCCATGTCAGCACAGCTGTAAAAGGCACCTTTGGATATCTTGATCCAGAGTACTTCAGGACCCAACAGTTGACAGACAAATCGGATGTTTACTCTTTTGGTGTGGTTCTTCTGGAAGTGCTATGTGCCAGACCAGTTATCAATCCCTCACTTCCAACGGAGCAAGTAAATCTAGCTGAATGGGTGATGGTTTGGCAGAAGAGAGGATTACTTGAACAGGTTATTGATCCTTTGCTCGTGGGTAAAGTCAATCTCAACTCACTAAGAAAATTTGGTGAAACGGCAGAGAAATGCTTGCAGGAAGAAGGAGCTGATAGGCCTACTATGGGTGATGTGGTGTGGGACTTGGAGTATGCTTTTCAGCTTCAACAAACTGCAATGCAGAGGGAGCCATTAGAGGACAGCACAAACGATGCTGCTTCCACATTTCCATTGCCTACCATTCAGCGTTATCCTTCATATAGCTTATCAATTTCAAACATCCATGGGCCCGAAAGGAGGGACAGCAGTTCAGAGACAACAGAAAGCGAAGTTTTCTCCCAGTTGAGGATTGCCCATGGCAGATAA 2529 43.65 MDKFQSHGVIVRLLHLLLPLQLLSLQSLSLSYTPPSKYFINCGSQNNTNHTGRTFVGDVSSDSSFTLSPKRDDPVVDSSPSPTTSQLYQTARIFKGSSSYVFHIDQNGTYLVRLHFFPFSSPTDLSTALFDVSVSGLPGLLQNFSVQNTSNLPLIKEFLLTINISKFTVKFEPSQESSFAFVNAIEVFIAPDSFIPDSALLVTRKGSKSSSYKGLLSRVLQKIHRVNVGGSEIEPGSDTLWRNWVPDDTFLFNRSTARNKSYDQPIEYQEGQSEYNNSDRYIAPENVYLTAKEMNTNEGDQLQSFNISWGFNVTKNATHLLRVHFCDITSASLSLSPWINLYINSIFSRNIKIITLAAPFYLDFVVVSDNSGLLNISIGPHRDSPVNNSFLNGLEIMEIMQELGWVSIENESKKKYIPLLVGSVVGGLALVCLVVVVLLLQSKCRKGKPTQATDWLPITVDRGLSSHGRLHEATNHSSPVPYLNLGLKIPFAEVRSATKNFSSKLLVGKGGFGKVYQGTLRNGMKVAVKRSQPGHGQGLPEFQTEILVLSKIHHRHLVSLVGYCDERNEMILVYEFMQKGTLRSHLYDSDLPCLSWKQRLEICIGAARGLHYLHTGSEGGIIHRDIKSTNILLDDNFVAKVADFGLSRSGLPHQTHVSTAVKGTFGYLDPEYFRTQQLTDKSDVYSFGVVLLEVLCARPVINPSLPTEQVNLAEWVMVWQKRGLLEQVIDPLLVGKVNLNSLRKFGETAEKCLQEEGADRPTMGDVVWDLEYAFQLQQTAMQREPLEDSTNDAASTFPLPTIQRYPSYSLSISNIHGPERRDSSSETTESEVFSQLRIAHGR* 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16116974 16119503 + Vvi7g1000 Vvi7g1000 789866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1000 842 Pfam Malectin-like domain 40 398 IPR024788 -
Vvi7g1000 842 PANTHER OS07G0166700 PROTEIN 26 826 IPR045272 GO:0004714|GO:0006468
Vvi7g1000 842 Pfam Protein tyrosine and serine/threonine kinase 507 767 IPR001245 GO:0004672|GO:0006468
Vvi7g1000 842 ProSiteProfiles Protein kinase domain profile. 501 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1000 842 CDD STKc_IRAK 507 771 - -
Vvi7g1000 842 SUPERFAMILY Protein kinase-like (PK-like) 475 771 IPR011009 -
Vvi7g1000 842 MobiDBLite consensus disorder prediction 813 834 - -
Vvi7g1000 842 Gene3D Transferase(Phosphotransferase) domain 1 577 795 - -
Vvi7g1000 842 SMART serkin_6 501 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1000 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Vvi7g1000 842 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 26 826 - -
Vvi7g1000 842 Gene3D Phosphorylase Kinase; domain 1 465 576 - -
Vvi7g1000 842 Gene3D - 36 190 - -
Vvi7g1000 842 Gene3D - 221 400 - -
Vvi7g1000 842 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76731 PF12819 Malectin_like 2.00E-29 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1000 - - vvi:100242323 1590.86