Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1001 ATGGAGAAGTTTCACGCACATGAAATCTTTGTTCAGCTGTTACATCTTCTCCTCCTGCTTCTCTTATCCCTTCAATGTATTTCTTCGGATTACACTCTTCCAAGTAAGTACTTCATCAACTGTGGGTCAAGCTCCACTATCAGCAATACCACGAGGACCTTCGTCGGGGACGAGAGTTCTGACTCCTTCACCTTATCTCCCAAGCAGGAGGCTGTTGAAGACAGCAGCCCTTCTCCGGCTACATCTCAACTCTATCGAACAGCGAGACTTTTCAGAAGCCCATCCTCATATGAGTTTGACATCGACCAAATCGGCATTTACTTGGTACGCCTCCATTTCTTCCCCTTTTCCTCCCCAACCGATCTCTTCACTGCTCTTTTCGATGTTTCGGTTTCTGGGTTACCCCTGTTGCTTCATAATTTCACTGTGCAAGACACCAGCAATCTTCCTCTCATAAAGGAATTCTTACTCACCATTAATATCAGCAAATTCATGGTGAAATTTGAACCGTCTCAACAGTCGTCCTTTGCATTTGTAAATGCTATAGAAGTCTTTATTGCTCCTGATAGCTTCATACCTGATTCTGCTCTACTAGTTACTCCAGCAGGAAGTAACAATAGTAGCTACAAGGGTATATCCTCTCGAGTTCTGCAAAAAGTTCACAGGATCAATGTTGGGGGCAGTGATATCGAACCCGATTCTGATACTCTATGGAGAAAATGGGTTCCAGATGACCCTTATCTTTTTAATAAGAGCGCTGCAAGAAATCGATCTGCCTCTACAGAGACTAGCTACCAGCGAATCTTGAGTGGTTATAACGACAGTACTCGTTATATTGCCCCACCTCTTGTTTATATGAGTGCCAAAGAAATGAATAAAAGTGACAGTGATCCGTTGCAATTTTTCAACATCAGTTGGGGTTTTGATGTGTCCAAGAATGCTAGGCACCTTCTTCGGGTTCACTTCTGCGACTTTATTAGCAACTCTGGGTCATTTAATCCATGGCTCAATCTCTATATTTATAGCTTCTTCAGTCGGAAAATAGACAATATCCCCTTGGGAGCTCCTTTTTTCCTTGATCTTTTAGTTGTTTCAGATGATTCTGGATTTCTCAATGTCAGTATAGGGCCTCAGATTGATTCTCCAGTTAACAATTCCTTCCTCAATGGCCTGGAGATTATGGAAATCATGGAGGAATTGGGTTGGGTTTCTATGGAAAATGAGTCTAAGAAGAAAACTACTCCTCTCCTAGTTGGTTTAGTTGTCGGAGGTTTGGCTCTCGTCTGCATTGTGATAGTTGTGCTCTTGTTGCGATCAAAATGCAGGAAGGAAAAGCCTGCTGAAGCTTCACACTGGTTGCCAGTTACTGTTGATGGGGGATTGAGTTCCCACAGCAGGGTATATGAGGCAACCATCCATGGCTCCCCTGTTCCTCATTTAAATCTGGGATTAAAAATACCTTTGGCTGAAATTCAATCTGCAACAAACAACTTCAGCAGCAAGTTGCTGGTTGGTAAGGGTGGATTTGGCAAAGTGTACCAAGGAACTCTCAGGAATGGCATGAAAGTGGCAGTGAAGAGAAGTCAGCCAGGACATGGCCAAGGCCTGCCTGAATTCCAGACTGAGATATTGGTGTTATCCAAAATTCGCCATCGCCACCTGGTTTCCCTGATTGGATATTGTGACGAAAGGAATGAAATGATTCTGGTTTATGAATTTATGCAGAATGGGACATTGAGAAATCATCTTTATGATTCAGATTTTCCGTGTTTGTCTTGGAAGCAAAGGCTGGAAATTTGCATTGGTGCGGCAAGGGGACTTCACTACCTCCACACAGGTTCAGAAGGGGGAATCATTCACCGTGATGTTAAGTCCACAAACATCTTGCTTGATGAAAATTTTGTTGCTAAAGTTGCTGATTTCGGGCTTTCAAGATCAGGTCTTCTCCATCAAACCCATGTTAGCACAGCTGTAAAAGGCACCATTGGATATCTTGATCCAGAGTATTTCAGGACCCAAAAATTGACAGAAAAATCTGATGTTTACTCTTTTGGTGTGGTTCTTCTGGAGGTGCTATGTGCCAGACCAGCTATCAATCCCTTACTTCCAAGGGAGCAAGTGAACCTAGCTGAATGGGTGATGGTTAGGCAGAAGGAAGGATTTCTTGAACATGTTATTGATCCTTTGCTCGTGGGTAAAGTTAATCTCAATTCACTAAGAAAATTTGGTGAAACGGCAGAGAAATGTTTGCAGGAAGATGGCGCTGATAGGCCTACAATGGGGGATGTGGTGTGGGACTTGGAGTATGCTTTTCAGCTTCAACAAACTGCAATGCAGAGGGAGCCTTTAGATGACAGCACAAATGACGCTGCTTCCACGTTTCCATTGCCTAATGTTCAGCGTTATCCTTCATATAGCTTATCCATTGACGGCACTCATGTGCCCGCAAGGAGGAACGATGGTTCAGAGACAACAGAAAGCGAAGTTTTCTCCCAGTTGAGGATTGATGATGGCAGATAA 2520 43.45 MEKFHAHEIFVQLLHLLLLLLLSLQCISSDYTLPSKYFINCGSSSTISNTTRTFVGDESSDSFTLSPKQEAVEDSSPSPATSQLYRTARLFRSPSSYEFDIDQIGIYLVRLHFFPFSSPTDLFTALFDVSVSGLPLLLHNFTVQDTSNLPLIKEFLLTINISKFMVKFEPSQQSSFAFVNAIEVFIAPDSFIPDSALLVTPAGSNNSSYKGISSRVLQKVHRINVGGSDIEPDSDTLWRKWVPDDPYLFNKSAARNRSASTETSYQRILSGYNDSTRYIAPPLVYMSAKEMNKSDSDPLQFFNISWGFDVSKNARHLLRVHFCDFISNSGSFNPWLNLYIYSFFSRKIDNIPLGAPFFLDLLVVSDDSGFLNVSIGPQIDSPVNNSFLNGLEIMEIMEELGWVSMENESKKKTTPLLVGLVVGGLALVCIVIVVLLLRSKCRKEKPAEASHWLPVTVDGGLSSHSRVYEATIHGSPVPHLNLGLKIPLAEIQSATNNFSSKLLVGKGGFGKVYQGTLRNGMKVAVKRSQPGHGQGLPEFQTEILVLSKIRHRHLVSLIGYCDERNEMILVYEFMQNGTLRNHLYDSDFPCLSWKQRLEICIGAARGLHYLHTGSEGGIIHRDVKSTNILLDENFVAKVADFGLSRSGLLHQTHVSTAVKGTIGYLDPEYFRTQKLTEKSDVYSFGVVLLEVLCARPAINPLLPREQVNLAEWVMVRQKEGFLEHVIDPLLVGKVNLNSLRKFGETAEKCLQEDGADRPTMGDVVWDLEYAFQLQQTAMQREPLDDSTNDAASTFPLPNVQRYPSYSLSIDGTHVPARRNDGSETTESEVFSQLRIDDGR* 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16125313 16127833 + Vvi7g1001 Vvi7g1001 789867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1001 839 Gene3D Phosphorylase Kinase; domain 1 464 573 - -
Vvi7g1001 839 Gene3D - 217 350 - -
Vvi7g1001 839 Gene3D - 35 187 - -
Vvi7g1001 839 Gene3D Transferase(Phosphotransferase) domain 1 574 792 - -
Vvi7g1001 839 SMART serkin_6 498 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1001 839 MobiDBLite consensus disorder prediction 810 839 - -
Vvi7g1001 839 Pfam Malectin-like domain 39 395 IPR024788 -
Vvi7g1001 839 Pfam Protein tyrosine and serine/threonine kinase 504 764 IPR001245 GO:0004672|GO:0006468
Vvi7g1001 839 CDD STKc_IRAK 504 768 - -
Vvi7g1001 839 PANTHER OS07G0166700 PROTEIN 24 816 IPR045272 GO:0004714|GO:0006468
Vvi7g1001 839 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 24 816 - -
Vvi7g1001 839 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Vvi7g1001 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Vvi7g1001 839 ProSiteProfiles Protein kinase domain profile. 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1001 839 SUPERFAMILY Protein kinase-like (PK-like) 482 768 IPR011009 -
Vvi7g1001 839 MobiDBLite consensus disorder prediction 816 839 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76732 PF12819 Malectin_like 9.50E-26 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1001 - - vvi:100252567 1629.38