Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1005 ATGGAGGGAAGAAGGGTTGTTGGTTGGGCTGCTAGGGATGCTTCTGGGCTTCTCTCTCCTTATTCATTCACTCTCAGAAAAACAGGTCCTGAAGACGTGGTGATCAAGGTGCTCTACTGTGGAATGGACCACACGGATCTTCATCAGATGAGGAACGAAGTACACTCCACTAATTACCCTTTGGTCCCAGGGCATGAAGTAGTGGGGGAAGTGGTGGAGTTGGGTTCAGAAGTGAAGAAATACAGAGTTGGGGACATGGTAGGAGTTGGATGCATGGTTGGGTCTTGTGGGAGATGCCTCTCTTGTAATTCCAACATAGAGCAATACTGCAATAACAGAATCTTCACCTACAATGGTATCTACAAAGACGGAAGACCAACTCAAGGAGGGTTCTGTTCTGCCATGATTGTTCATCAAAAGTTTGTTGTGAGGATTCCAGAAAAGCTTTCACCGGAGCAAGCTGCACCACTGCTGTGTGCTGGGGTGACGGCTTACAGTCCCTTAAGACAGTTCATGGGGTCCGGTAAGGTTCTCAATGCAGGAATTTTGGGTTTGGGGGGAGTTGGTCATCTGGGTGTTAAAATAGCGAAGGCAATGGGGCATCATGTGACTGTGATCAGCTCTTCTGATAAGAAAAGGGAGGAGGCTTTGCAGCACTTGGGAGCGGATGCTTTCCTAGTGAGCTCCAATGCGGCCGAGATGGAAGAAGCTGCAAACAATCTCGACTATATTCTTGACACCGTGCCGGCTTTGCACCCTTTGCAGTCTTATCTTTCACTTCTTAAAGTTGATGGGAAGCTATTCTTGGTTGGAGTATCTCCAAAACCACTGCAATTTGATGCAACCGATTTGATTCTAGGGAAGAAGAATATTACTGGAAGTTTCATTGGAAGCATGGAAGAGACTCAAGAAATATTAGACTTCTGGGCTGAGAAGAATTTGACTTCAATGATAGAGATAGTGAAGATGGACTACGTGAACAAGGCATTTGAAAGAATGGAAAGAAGCGATGTCAGGTATCGGTTTGTGGTGGATGTAGCTGGTAGCAACCTTGAATGA 1059 46.08 MEGRRVVGWAARDASGLLSPYSFTLRKTGPEDVVIKVLYCGMDHTDLHQMRNEVHSTNYPLVPGHEVVGEVVELGSEVKKYRVGDMVGVGCMVGSCGRCLSCNSNIEQYCNNRIFTYNGIYKDGRPTQGGFCSAMIVHQKFVVRIPEKLSPEQAAPLLCAGVTAYSPLRQFMGSGKVLNAGILGLGGVGHLGVKIAKAMGHHVTVISSSDKKREEALQHLGADAFLVSSNAAEMEEAANNLDYILDTVPALHPLQSYLSLLKVDGKLFLVGVSPKPLQFDATDLILGKKNITGSFIGSMEETQEILDFWAEKNLTSMIEIVKMDYVNKAFERMERSDVRYRFVVDVAGSNLE* 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16177166 16178863 - Vvi7g1005 Vvi7g1005 789871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1005 352 CDD CAD1 7 345 - -
Vvi7g1005 352 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Vvi7g1005 352 Pfam Alcohol dehydrogenase GroES-like domain 31 144 IPR013154 -
Vvi7g1005 352 PANTHER ALDEHYDE REDUCTASE 2 351 - -
Vvi7g1005 352 Pfam Zinc-binding dehydrogenase 187 308 IPR013149 -
Vvi7g1005 352 Gene3D - 160 316 - -
Vvi7g1005 352 SUPERFAMILY GroES-like 13 171 IPR011032 -
Vvi7g1005 352 SMART PKS_ER_names_mod 16 344 IPR020843 GO:0016491
Vvi7g1005 352 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 2 351 - -
Vvi7g1005 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 149 314 IPR036291 -
Vvi7g1005 352 Gene3D - 9 346 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g629 Vvi7g1005 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1005 K00083 - vvi:100247381 645.966