Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1011 ATGGCCCTGCAAGAACAAGAGACTCTGTCGCAGAACGCTCCATTCTTTCTTGATGGTCTCTACTGTGAAGAAGAGCATGGGTTTTTAACGGTGGCTCGTACAAAGGCTGTTGAGTGGATGCTGAAGGTCAATGCTCACTATGGGTTTTCTGCTCTGACTGCAGTTCTTGCTGTTAACTACTTTGATAGGTTTCTGTCGAGTTCGTGTTTTCAGAGAGATAAGCCCTGGATGAGTCAACTCGCTGCTGTCACTTGTCTCTCTTTGGCTGCAAAGGTGGACGAGACCGATGTTCCTCTTCTCTTGGACCTGCAGGTGGAGGAGACAAAATATGTGTTTGAAGCGAAGACGATTCAGAGGATGGAACTTCTGGTGCTCTCTAGTCTTCAGTGGAAGATGAATCCAGTGACCCCAATTTCGTTTTTTGATCACATTATAAGGAGGCTTGGATTGAAGACCCACTTGCATTGGGAGTTTCTGGAGAGGTGTGAGCGCCTTCTCCTCTCTGTCATTGCTGATTCGAGGTTCTTGTGTTATCTTCCTTCCACCTTAGCTACTGCAACCATGCTGCATATAATCACAGAGGTTGAACCTTGTAATCCATTGGAATACCAGAATCAGCTTCTGAGTGTACTCAAAATCAGTAAGAACGATGTGGATGACTGCTATAAACTTATCCTGGAATTTTTGGGTAGCCATGGGCATACCCAAAACCAGACCCACAAGCGCAAGCATCTGTCCCTGCCCAGCAGCCCAAGTGGCATCTTTGATGCGCCCTTTAGCTGTGATAGCTCCAGTGATTCATGGGCTATGGCGACATCAATTTCATCATCTTCCCAGCCTCTTTTCAAAAAGAGCAGAGCCCAGGACCAGCAGATGCGACTTCCTTCACTGAATCGAGTGTCTGTTGATGTGCTTAGCAGCCCTCGTTAA 930 46.99 MALQEQETLSQNAPFFLDGLYCEEEHGFLTVARTKAVEWMLKVNAHYGFSALTAVLAVNYFDRFLSSSCFQRDKPWMSQLAAVTCLSLAAKVDETDVPLLLDLQVEETKYVFEAKTIQRMELLVLSSLQWKMNPVTPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVIADSRFLCYLPSTLATATMLHIITEVEPCNPLEYQNQLLSVLKISKNDVDDCYKLILEFLGSHGHTQNQTHKRKHLSLPSSPSGIFDAPFSCDSSSDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVLSSPR* 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16254592 16256503 - Vvi7g1011 Vvi7g1011 789877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1011 309 SMART cyclin_7 38 126 IPR013763 -
Vvi7g1011 309 SUPERFAMILY Cyclin-like 11 133 IPR036915 -
Vvi7g1011 309 SUPERFAMILY Cyclin-like 117 233 IPR036915 -
Vvi7g1011 309 MobiDBLite consensus disorder prediction 275 309 - -
Vvi7g1011 309 Pfam Cyclin, N-terminal domain 29 133 IPR006671 -
Vvi7g1011 309 SMART Cyclin_C_2 135 253 IPR004367 -
Vvi7g1011 309 CDD CYCLIN 33 125 IPR013763 -
Vvi7g1011 309 Pfam Cyclin, C-terminal domain 135 245 IPR004367 -
Vvi7g1011 309 Gene3D - 134 223 - -
Vvi7g1011 309 ProSitePatterns Cyclins signature. 33 64 IPR006671 -
Vvi7g1011 309 Gene3D - 29 133 - -
Vvi7g1011 309 PANTHER CYCLIN-D3-2 27 292 - -
Vvi7g1011 309 PANTHER CYCLINS 27 292 IPR039361 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g609 Vvi7g1011 ECH
Vvi7g1011 Vvi18g719 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1011 K14505 - vvi:100267897 555.058