Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g1015 | ATGCCAGCTGAGAGTGTTGTAAGCACCTCCACAACTACACAACCTGGTGTTCTCGAATCCTTCACAAAAGGGTTAGTTGACTCATCAAAGAGTGCAGTGAAGGCTGTGCAGGTCAAGGCACGCCATATTGTCTCTCAAAACAAACGAAGATACCAGGAAGGAGAATTTGATTTGGATATGACTTACATCACTGAGAACATAATTGCAATGGGGTTTCCTGCTGGTGATATGAGCTCTGGGTTTTTAGGATTTATTGAGGGATTTTATCGAAATCACATGGAAGAAGTGATCAAGTTTTTTGAAACTCATCACAAGGGCAAATATAAGGTATACAATCTTTGTTCAGAGCGGCTCTACGATGCATCACTCTTTGAGGGAAAGGTTGCATCCTTCCCCTTTGATGACCATAACTGCCCCCCTATTCAACTCATAACTTCATTTTGTCAAAGTGCATACTCATGGTTGAAGCAAGATATTGAGAATGTGGTGGTTGTTCATTGCAAAGCTGGGATGGCAAGGACAGGACTAATGCTTTCAAGCCTTCTTTTATTCCTAAAGTTCTTCCCGACAGCTGAGGAGTCCATCAACTATTACAACCAAAAAAGATGCTTAGATGGGAAGGGTCTAGTTCTCCCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGCATCTTAACACACTTCAATGGTCAAAATCCTCCTGGACGCAGGTGCATGCTTAGAGGGTTTCGGCTTCATAGGTGCCCTTCCTGGTTTAGGCCCTCCATTACAGTCTCTGATCATAATGGAATTTTATTCTCAACAAGAAAGCATCCAAAAACCAAGGATCTAATGCCAGAAGACTTTTGGATCAGTGCAGCAAAGAAAGGGATTGTGGTCTTTGCTCTACCGAGGGAGCCTGGTCTGGCAGAGTTGGCTGGAGACTTCAAGTTCCATTTTCATGACAGTGAAGGAGATTTTTACTGTTGGTTAAATACGACAATGACAGAAAACAGAAAAATTTTGAGCACCTATGATCTTGATGGATTCGAAAAGAGGAAACTGCCTTCACCTGGATTCCAGGTTGAAGTTGTGATGATAGATTATGACGGAACCATTCAGACAAGGTTTAAATCTGATTCAAGCAGGAACGGTATGAGCGGCGAAGTGGTAAGGGAGGCAGGAAACCCATTGAATTCATTGCATTGGATTTTTTTTTTTTCAAAAAAAAAACCAAAAAGAATTCCTTTCATTCTTTCTGTGAAATCTTTAGACTTTGAAGAAAGTATCTATTGA | 1275 | 41.1 | MPAESVVSTSTTTQPGVLESFTKGLVDSSKSAVKAVQVKARHIVSQNKRRYQEGEFDLDMTYITENIIAMGFPAGDMSSGFLGFIEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLITSFCQSAYSWLKQDIENVVVVHCKAGMARTGLMLSSLLLFLKFFPTAEESINYYNQKRCLDGKGLVLPSQIRYVKYFERILTHFNGQNPPGRRCMLRGFRLHRCPSWFRPSITVSDHNGILFSTRKHPKTKDLMPEDFWISAAKKGIVVFALPREPGLAELAGDFKFHFHDSEGDFYCWLNTTMTENRKILSTYDLDGFEKRKLPSPGFQVEVVMIDYDGTIQTRFKSDSSRNGMSGEVVREAGNPLNSLHWIFFFSKKKPKRIPFILSVKSLDFEESIY* | 425 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 16284266 | 16290893 | - | Vvi7g1015 | Vvi7g1015 | 789881 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g1015 | 424 | CDD | PTP_PTEN | 59 | 224 | IPR045101 | GO:0016791 | |
Vvi7g1015 | 424 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 3 | 384 | - | - | |
Vvi7g1015 | 424 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 165 | 175 | IPR016130 | GO:0016311|GO:0016791 | |
Vvi7g1015 | 424 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 49 | 228 | IPR029023 | - | |
Vvi7g1015 | 424 | ProSiteProfiles | C2 tensin-type domain profile. | 235 | 362 | IPR014020 | - | |
Vvi7g1015 | 424 | SMART | PTEN_C2_2 | 233 | 361 | IPR014020 | - | |
Vvi7g1015 | 424 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 163 | 202 | IPR000387 | GO:0016311|GO:0016791 | |
Vvi7g1015 | 424 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A-LIKE | 3 | 384 | - | - | |
Vvi7g1015 | 424 | Gene3D | Protein tyrosine phosphatase superfamily | 34 | 231 | IPR029021 | - | |
Vvi7g1015 | 424 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 62 | 230 | IPR029021 | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g1015 | K01110 | - | vvi:100259289 | 776.548 |