Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1021 ATGGCTGTGGAGCTGATGATGGGTTACAGAAACGATGGTTTTGCCGACAAAATGGAGGAGAACGCTGTGCAGGAAGCCGCTGCTGGGCTGGAAAGCGTCGAGAAGCTGATAAGGTTGCTGTCTCATGATGGATTGCAGGGCCGTGGCGGATGTCGCCGTTTCCAAGTTCAAGAAGGTGATTTCTCTTCTGGGTCGGACCAGAACCGGTCACGCTCGGTTCAGGAGGGCTCCTTTGTCCTCTCCTCCCAACCAAAGCGAGGAATCACAGGGCGGAATGGTGTGATCGATCGTAAAGATTCGACGACCACCATCAATTTCTCATACTCTTCGGCGATTTCCGGTGCGAATTCGTTTATGTCGTCGCTGACTGGCGATACTGATAGCAAGCAACCCTCATCGTCGTCGGCTTTTCAGATTACGAATCTGTCTCAGGTTTCGTCGGTGGGAAGGCCGCCGCTGTCTTCTTCGTCCATGAAAAGGAAGTGCAGTTCGTCGGACAATCCCGGCTCCGGCAAGTGCGGTGGGTCCTCTGGCCGGTGCCATTGTTTGAAGAGAAGAAAGATGAAATTGAAGAGGGTGGTTAGAGTTCCGGCAATAAGCATGAAAATGGCCGATATTCCACCAGATGATTTCTCTTGGAGGAAGTACGGACAGAAACCAATAAAAGGATCTCCACATCCAAGGGGCTACTACAAGTGCAGTAGCGTGAGAGGTTGCCCAGCACGCAAACATGTAGAGAGAGCTCTGGACGACCCAAAGATGCTGATTGTCACCTACGAAGGCGAGCACAACCACTCTCTCTCCGTCGCAGAAGCCGCTGGTCTCATCCTAGAATCTTCTTAG 843 52.19 MAVELMMGYRNDGFADKMEENAVQEAAAGLESVEKLIRLLSHDGLQGRGGCRRFQVQEGDFSSGSDQNRSRSVQEGSFVLSSQPKRGITGRNGVIDRKDSTTTINFSYSSAISGANSFMSSLTGDTDSKQPSSSSAFQITNLSQVSSVGRPPLSSSSMKRKCSSSDNPGSGKCGGSSGRCHCLKRRKMKLKRVVRVPAISMKMADIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPKMLIVTYEGEHNHSLSVAEAAGLILESS* 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16322548 16324116 + Vvi7g1021 Vvi7g1021 789887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1021 280 Pfam WRKY DNA -binding domain 209 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1021 280 Pfam Plant zinc cluster domain 159 205 IPR018872 -
Vvi7g1021 280 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 13 46 - -
Vvi7g1021 280 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 91 280 - -
Vvi7g1021 280 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 91 280 IPR044810 GO:0003700
Vvi7g1021 280 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 46 IPR044810 GO:0003700
Vvi7g1021 280 MobiDBLite consensus disorder prediction 58 96 - -
Vvi7g1021 280 SMART WRKY_cls 207 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1021 280 Gene3D WRKY domain 194 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi7g1021 280 ProSiteProfiles WRKY domain profile. 202 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1021 280 MobiDBLite consensus disorder prediction 122 172 - -
Vvi7g1021 280 MobiDBLite consensus disorder prediction 122 177 - -
Vvi7g1021 280 SUPERFAMILY WRKY DNA-binding domain 204 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi7g1021 280 MobiDBLite consensus disorder prediction 58 88 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1021 Vvi18g727 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14982 PF03106 WRKY 4.50E-26 CL0274 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1021 - - vvi:100244122 348.591