Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g1058 | ATGTCCGATCACAGAACTACGCTCATGAACGATCAGCTCTCCAAACCCACTTCCATATTTGGTCTTCGCTTGTGGGTGGTTTTGGCTGTGTCCAAAGAGATCCAGGAAATCAGAATTGACCATGGCCACCGAAGCCAGATTCAGGCCGACCCATTTCCCGAATCGGATCAATTGGCCGGAATAGAAGGGCAGGCATTGCTTCTTCCACCGGGAGAGGAAATTGCTCCCGAAGTTTCGCATTTGGGGTGGGGCCATTGGTATACCTTGAGAGAGCTCGAGGCTTCCACGAATGCGTTTGCCGACGACCACGTTATTGGGGAAGGTGGGTATGGGATTGTTTACCATGGTGTCTTGGAGGATAACACACAGGTTGCTGTCAAGAACTTGCTCAATAATAGGGGACAAGCTGAGAAGGAGTTTAAGGTTGAAGTAGAAGCAATTGGACGAGTTCGACATAAAAATTTAGTGAGATTGCTTGGTTACTGTGCGGAAGGAGCTCATAGGATGCTTGTGTATGAGTATGTAAATAATGGGAATTTGGAGCAGTGGCTTCATGGTGATGTAGGGCCTCGAAGTCCTCTTACTTGGGAGATTCGAATGAATATAATCCTGGGAACTGCAAAAGGGTTAACTTATCTTCATGAGGGACTTGAACCCAAAGTTGTTCACCGTGATATAAAATCGAGCAACATTTTACTTGATAAGCAGTGGAATCCCAAGGTTTCAGACTTTGGCCTTGCCAAGCTCCTTGGCTCAGAGCACAGCTATGTAACAACCCGAGTGATGGGAACATTTGGCTATGTAGCTCCTGAATATGCAAGTACAGGCATGTTGAATGAAAGAAGTGATGTGTATAGTTTTGGGATTCTTATCATGGAAATAATTTCTGGGAGGAATCCAGTCGACTATAGCCGCCCTCCAGAAGAGGTGAACTTAGTTGACTGGCTTAAGAGGATGGTTACCAGCAGGAATCCAGAGGGAGTTTTGGATCCAAAGATACCTGAGAAGCCGACTTCAAGGGCCTTGAAGCGGGCTCTTCTCGTAGCTCTGCGCTGTGTTGATCCAAACTCACAGAAGCGGCCAAAAATGGGTCATGTTATACATATGCTTGAAGCTGAAGAATCCCCCTTCAGAGATGATCGTAGAGCAGGGAGAGATTCAGTACGTGCACATCGTGACAGCCCAAGGAATGGATTGATGGAGAAGCGAGTCACAGAATCAGGGGATAGTAGTGGGTATGAAAGTGGGGCTCATGCCAATAGACAAAGGTGGAGACAAGAAGAAAGCCAAGCAGAAAAGCAGTGA | 1305 | 46.82 | MSDHRTTLMNDQLSKPTSIFGLRLWVVLAVSKEIQEIRIDHGHRSQIQADPFPESDQLAGIEGQALLLPPGEEIAPEVSHLGWGHWYTLRELEASTNAFADDHVIGEGGYGIVYHGVLEDNTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPRSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSEHSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIISGRNPVDYSRPPEEVNLVDWLKRMVTSRNPEGVLDPKIPEKPTSRALKRALLVALRCVDPNSQKRPKMGHVIHMLEAEESPFRDDRRAGRDSVRAHRDSPRNGLMEKRVTESGDSSGYESGAHANRQRWRQEESQAEKQ* | 435 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 16701374 | 16704650 | + | Vvi7g1058 | Vvi7g1058 | 789924 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g1058 | 434 | Gene3D | Transferase(Phosphotransferase) domain 1 | 175 | 391 | - | - | |
Vvi7g1058 | 434 | MobiDBLite | consensus disorder prediction | 376 | 434 | - | - | |
Vvi7g1058 | 434 | Gene3D | Phosphorylase Kinase; domain 1 | 73 | 174 | - | - | |
Vvi7g1058 | 434 | PANTHER | OS01G0323000 PROTEIN | 28 | 73 | - | - | |
Vvi7g1058 | 434 | PANTHER | OS01G0323000 PROTEIN | 74 | 423 | - | - | |
Vvi7g1058 | 434 | PANTHER | OS01G0323000 PROTEIN | 1 | 30 | - | - | |
Vvi7g1058 | 434 | ProSiteProfiles | Protein kinase domain profile. | 99 | 378 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi7g1058 | 434 | PANTHER | RECEPTOR-LIKE KINASE PLANT | 28 | 73 | - | - | |
Vvi7g1058 | 434 | PANTHER | RECEPTOR-LIKE KINASE PLANT | 74 | 423 | - | - | |
Vvi7g1058 | 434 | PANTHER | RECEPTOR-LIKE KINASE PLANT | 1 | 30 | - | - | |
Vvi7g1058 | 434 | SUPERFAMILY | Protein kinase-like (PK-like) | 78 | 371 | IPR011009 | - | |
Vvi7g1058 | 434 | ProSitePatterns | Protein kinases ATP-binding region signature. | 105 | 127 | IPR017441 | GO:0005524 | |
Vvi7g1058 | 434 | MobiDBLite | consensus disorder prediction | 420 | 434 | - | - | |
Vvi7g1058 | 434 | MobiDBLite | consensus disorder prediction | 376 | 403 | - | - | |
Vvi7g1058 | 434 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 221 | 233 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi7g1058 | 434 | CDD | STKc_IRAK | 105 | 371 | - | - | |
Vvi7g1058 | 434 | Pfam | Protein kinase domain | 101 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi7g1058 | 434 | SMART | serkin_6 | 99 | 377 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76735 | PF00069 | Pkinase | 2.80E-48 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g1058 | - | - | vvi:100254248 | 838.18 |