Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1058 ATGTCCGATCACAGAACTACGCTCATGAACGATCAGCTCTCCAAACCCACTTCCATATTTGGTCTTCGCTTGTGGGTGGTTTTGGCTGTGTCCAAAGAGATCCAGGAAATCAGAATTGACCATGGCCACCGAAGCCAGATTCAGGCCGACCCATTTCCCGAATCGGATCAATTGGCCGGAATAGAAGGGCAGGCATTGCTTCTTCCACCGGGAGAGGAAATTGCTCCCGAAGTTTCGCATTTGGGGTGGGGCCATTGGTATACCTTGAGAGAGCTCGAGGCTTCCACGAATGCGTTTGCCGACGACCACGTTATTGGGGAAGGTGGGTATGGGATTGTTTACCATGGTGTCTTGGAGGATAACACACAGGTTGCTGTCAAGAACTTGCTCAATAATAGGGGACAAGCTGAGAAGGAGTTTAAGGTTGAAGTAGAAGCAATTGGACGAGTTCGACATAAAAATTTAGTGAGATTGCTTGGTTACTGTGCGGAAGGAGCTCATAGGATGCTTGTGTATGAGTATGTAAATAATGGGAATTTGGAGCAGTGGCTTCATGGTGATGTAGGGCCTCGAAGTCCTCTTACTTGGGAGATTCGAATGAATATAATCCTGGGAACTGCAAAAGGGTTAACTTATCTTCATGAGGGACTTGAACCCAAAGTTGTTCACCGTGATATAAAATCGAGCAACATTTTACTTGATAAGCAGTGGAATCCCAAGGTTTCAGACTTTGGCCTTGCCAAGCTCCTTGGCTCAGAGCACAGCTATGTAACAACCCGAGTGATGGGAACATTTGGCTATGTAGCTCCTGAATATGCAAGTACAGGCATGTTGAATGAAAGAAGTGATGTGTATAGTTTTGGGATTCTTATCATGGAAATAATTTCTGGGAGGAATCCAGTCGACTATAGCCGCCCTCCAGAAGAGGTGAACTTAGTTGACTGGCTTAAGAGGATGGTTACCAGCAGGAATCCAGAGGGAGTTTTGGATCCAAAGATACCTGAGAAGCCGACTTCAAGGGCCTTGAAGCGGGCTCTTCTCGTAGCTCTGCGCTGTGTTGATCCAAACTCACAGAAGCGGCCAAAAATGGGTCATGTTATACATATGCTTGAAGCTGAAGAATCCCCCTTCAGAGATGATCGTAGAGCAGGGAGAGATTCAGTACGTGCACATCGTGACAGCCCAAGGAATGGATTGATGGAGAAGCGAGTCACAGAATCAGGGGATAGTAGTGGGTATGAAAGTGGGGCTCATGCCAATAGACAAAGGTGGAGACAAGAAGAAAGCCAAGCAGAAAAGCAGTGA 1305 46.82 MSDHRTTLMNDQLSKPTSIFGLRLWVVLAVSKEIQEIRIDHGHRSQIQADPFPESDQLAGIEGQALLLPPGEEIAPEVSHLGWGHWYTLRELEASTNAFADDHVIGEGGYGIVYHGVLEDNTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPRSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSEHSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIISGRNPVDYSRPPEEVNLVDWLKRMVTSRNPEGVLDPKIPEKPTSRALKRALLVALRCVDPNSQKRPKMGHVIHMLEAEESPFRDDRRAGRDSVRAHRDSPRNGLMEKRVTESGDSSGYESGAHANRQRWRQEESQAEKQ* 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16701374 16704650 + Vvi7g1058 Vvi7g1058 789924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1058 434 Gene3D Transferase(Phosphotransferase) domain 1 175 391 - -
Vvi7g1058 434 MobiDBLite consensus disorder prediction 376 434 - -
Vvi7g1058 434 Gene3D Phosphorylase Kinase; domain 1 73 174 - -
Vvi7g1058 434 PANTHER OS01G0323000 PROTEIN 28 73 - -
Vvi7g1058 434 PANTHER OS01G0323000 PROTEIN 74 423 - -
Vvi7g1058 434 PANTHER OS01G0323000 PROTEIN 1 30 - -
Vvi7g1058 434 ProSiteProfiles Protein kinase domain profile. 99 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1058 434 PANTHER RECEPTOR-LIKE KINASE PLANT 28 73 - -
Vvi7g1058 434 PANTHER RECEPTOR-LIKE KINASE PLANT 74 423 - -
Vvi7g1058 434 PANTHER RECEPTOR-LIKE KINASE PLANT 1 30 - -
Vvi7g1058 434 SUPERFAMILY Protein kinase-like (PK-like) 78 371 IPR011009 -
Vvi7g1058 434 ProSitePatterns Protein kinases ATP-binding region signature. 105 127 IPR017441 GO:0005524
Vvi7g1058 434 MobiDBLite consensus disorder prediction 420 434 - -
Vvi7g1058 434 MobiDBLite consensus disorder prediction 376 403 - -
Vvi7g1058 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Vvi7g1058 434 CDD STKc_IRAK 105 371 - -
Vvi7g1058 434 Pfam Protein kinase domain 101 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1058 434 SMART serkin_6 99 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g587 Vvi7g1058 ECH
Vvi7g1058 Vvi18g746 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76735 PF00069 Pkinase 2.80E-48 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1058 - - vvi:100254248 838.18