Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1094 ATGCTGGACCCTGAGCAGAATGGCAGGGCTGAACGGGTGCAGTGGGTGCTGAATGCTCCTGAGCCACCAGGCCTGTGGCAAGAACTCATGGACTCAATAAGGGAAACTGCTTTCCCTCATGGAAACAATTTCCCATCTCTCCAAAAGCAGCCTACTACTCATGCCATTTCAGTCCTGCAGGGCATATTTCCTATCCTTCAATGGTGCAGAAACTACAAGGCAACCAAATTTAAGAAGGATTTAATGGCGGGTTTAACTCTTGCAAGCTTGTCCATTCCTCAGAGTATTGGATATGCAACTTTGGCCAAGCTTGATCCTCAATTCGGACTCTATACAAGTGCTATTCCACCACTCATTTATGCTTTAATGGGGACTTCAAGAGAGATAGCAATTGGACCAGTGGCTGTGGTTTCTCTGTTGATCTCTTCAATGGTTCCGAAACTTGAAGATCCTGTAGATAATCCAATTGCCTACAGAAAGCTTGTGTTTACTGCAACCTTTCTTGCAGGTATCTTTCAAGCTGCTTTTGCACTGCTAAGGCTGGGTTTTCTTGTGGATTTTCTTTCCCATGCTGCTCTGGTTGGGTTCATGGCGGGTGCAGCTGTTGTCATCGGTCTTCAACAACTGAAGGGACTGCTTGGGATCACTCACTTCACAAACAAAACTGATGTCATCTCTGTTCTGGAAGCTGTTTGGAGATCATTTCATCATACTTGGAGTCCCTACAATTTTATCCTCGGCTGCTCCTTCCTGAGCTTTATTCTAATTACCAGATTTGTGGGAAGAAGGAACAAGAAACTGTTCTGGTTGCCAGCCATTGCTCCTCTAGTGTCTGTTATTTTATCAACACTGATAGTTTTTCTCACAAGAGCTGATAAACATGGAGTTAAGGTAGTGAAACACATCAAGGGAGGCTTGAATCCAAGCTCAGTTCATCAGCTACAGTTCACTGGTCCACATACTGGAGAGATAGCCAAAATTGGGCTGATTGTGGCCATTATTGCACTTACAGAAGCCATTGCAGTTGGCCGGTCTTTTGCATCCATAAAAGGATACCATCTGGATGGAAACAAAGAAATGGTTGCTCTGGGCATCATGAACATTGCAGGATCTCTGACTTCTTGCTATGTTGCAACAGGTTCATTCTCACGCTCTGCGGTAAATTTCAGTGCTGGTTGTGAAACTGCCATTTCCAACATTGTGATGGCCATCACTGTGTTGATATCTTTGCAATTCTTCACAAAGCTCTTGTATTTCACTCCAACTGCAATCCTTGCTTCAATTATTCTTTCTGCTATTCCGGGACTCATTGACATCAGTGAAGCTTACAAAATATGGAAGGTGGACAAGTTGGATTTCCTAGCTTGCATTGGAGCATTCTTGGGGGTTCTGTTTGGTTCTGTGGAAATCGGTCTTCTTGTTGCGTTAACAATATCATTTGCAAAGATCATACTTAATGCAATTAGACCAGGCATTGAGACTCTGGGAAGACTTCCAGGAACCAATATGTTCTGTGATGTAGATCAATATCCCATGGCTATTACAAGCCCTGGAGTTCTGATCGTCCGTGTCAAGTCTGCCCTCCTTTGTTTCGCAAATGCCAATTTTGTTAGAGAAAGGATTATGATGTGGGTGACTGAGGAAGCAGAGGACAATAAGGGAAGTGCAAAAGGGAGGAATCAACTGGTAGTTCTTGACATGTCCAACTTGATGAACATCGACACCTCGGGAATTGCTTCTCTGGAGGAGGTGCATAAGCAACTGGTCTCACAAGGAATGGAGCTAGCCATAGCCAACCCCAGGTGGCAAGTGATTCACAAGCTAAAGCTAGCAAAGTTTGTGAACAAAATTGGAGGAAGGGTCTTCTTGTCTGTTGCAGAAGCTGTGGATGAATGCTCCACCATCAAGATTATGACTACTATTTAG 1926 44.08 MLDPEQNGRAERVQWVLNAPEPPGLWQELMDSIRETAFPHGNNFPSLQKQPTTHAISVLQGIFPILQWCRNYKATKFKKDLMAGLTLASLSIPQSIGYATLAKLDPQFGLYTSAIPPLIYALMGTSREIAIGPVAVVSLLISSMVPKLEDPVDNPIAYRKLVFTATFLAGIFQAAFALLRLGFLVDFLSHAALVGFMAGAAVVIGLQQLKGLLGITHFTNKTDVISVLEAVWRSFHHTWSPYNFILGCSFLSFILITRFVGRRNKKLFWLPAIAPLVSVILSTLIVFLTRADKHGVKVVKHIKGGLNPSSVHQLQFTGPHTGEIAKIGLIVAIIALTEAIAVGRSFASIKGYHLDGNKEMVALGIMNIAGSLTSCYVATGSFSRSAVNFSAGCETAISNIVMAITVLISLQFFTKLLYFTPTAILASIILSAIPGLIDISEAYKIWKVDKLDFLACIGAFLGVLFGSVEIGLLVALTISFAKIILNAIRPGIETLGRLPGTNMFCDVDQYPMAITSPGVLIVRVKSALLCFANANFVRERIMMWVTEEAEDNKGSAKGRNQLVVLDMSNLMNIDTSGIASLEEVHKQLVSQGMELAIANPRWQVIHKLKLAKFVNKIGGRVFLSVAEAVDECSTIKIMTTI* 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17132818 17136150 + Vvi7g1094 Vvi7g1094 789960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1094 641 Pfam STAS domain 510 628 IPR002645 -
Vvi7g1094 641 ProSitePatterns SLC26A transporters signature. 106 127 IPR018045 GO:0008271|GO:0008272
Vvi7g1094 641 Gene3D STAS domain 489 635 IPR036513 -
Vvi7g1094 641 SUPERFAMILY SpoIIaa-like 515 632 IPR036513 -
Vvi7g1094 641 CDD STAS_SulP_like_sulfate_transporter 510 623 - -
Vvi7g1094 641 ProSiteProfiles STAS domain profile. 529 632 IPR002645 -
Vvi7g1094 641 TIGRFAM sulP: sulfate permease 64 627 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi7g1094 641 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 7 638 - -
Vvi7g1094 641 Pfam Sulfate permease family 77 457 IPR011547 GO:0016021
Vvi7g1094 641 PANTHER SULFATE TRANSPORTER 7 638 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1094 Vvi18g368 ECH
Vvi7g1094 Vvi18g369 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1094 K17469 - vvi:100257574 1225.31