Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1127 ATGGGCATATACGAGCCACTCCACCAGATTAGCACGTGGGGAGAAAGCTTCAAAACTAATGGTTGTCCAAATACATCAGCATCCACAATTGCAGAGTTGGAAGCCAAACTAGACAATCAGTCAGAGGACACTTCACATGGAACACCTGGACCTTCTGATAAGTATGACCAAGAAGCTACTAAGCCTGTTGATAAGGTACAAAGACGTCTTGCACAAAACCGTGAGGCTGCTCGTAAAAGCCGTCTGAGGAAAAAGGCCTATGTTCAGGAGTTAGAATCTAGTAGGGTGAAACTGATGCAATTAGAGCAAGAACTCGAGCGTGCTAGACAACAGGGATTGTATATAGGTGGTGGGTTAGATGCTGGTCATCTAGGGTTCTCTGGAGCTGTAAACTCAGGAATTGCTGCATTTGAGATGGAGTATGGTCATTGGGTAGAAGAACAAAGTAGTCAGATCTGTGAGCTGAGAACTGCTTTGCATGCTCATATAAGTGATGTAGAGCTCCGGATACTGGTGGAGACTGCCATGAACCACTATTTCAATCTTTTCCGCATGAAAGCTAATGCTGCAAAGGCTGACGTGTTCTACATGATGTCTGGCATGTGGAAAACATCAGCTGAACGATTTTTCTTATGGATTGGAGGGTTTCGCCCTTCTGAGCTTCTAAAGGTTCTTGTTCCACAGCTGGACCCGTTAACAGACCAACAAATTTTGGATGTTTGTAACCTTCGACAATCTTGTCAACAAGCCGAAGATGCTCTTACACAAGGAATGGAGAAACTCCAACAAATTCTGGCTGAGGCTGTTGCAGCTGGTCAACTGGGCGAAGGAAGCTACATCCCCCAACTGGCTACTGCTCTGGAGAAATTGGAAGCTGTGGTGAGCTTCGTGAATCAGGCGGACCATCTTCGTCAGGAAACTCTGCAGCAGATGGTACGCATCCTAACAGTCCGTCAAGCAGCTCGGGGCCTGCTTGCCCTGGGGGAGTACTTCCAGCGTCTTCGAGCCTTGAGTTCACTCTGGGCTACCCGTCCTCGTGAGCCTGCCTAG 1050 47.71 MGIYEPLHQISTWGESFKTNGCPNTSASTIAELEAKLDNQSEDTSHGTPGPSDKYDQEATKPVDKVQRRLAQNREAARKSRLRKKAYVQELESSRVKLMQLEQELERARQQGLYIGGGLDAGHLGFSGAVNSGIAAFEMEYGHWVEEQSSQICELRTALHAHISDVELRILVETAMNHYFNLFRMKANAAKADVFYMMSGMWKTSAERFFLWIGGFRPSELLKVLVPQLDPLTDQQILDVCNLRQSCQQAEDALTQGMEKLQQILAEAVAAGQLGEGSYIPQLATALEKLEAVVSFVNQADHLRQETLQQMVRILTVRQAARGLLALGEYFQRLRALSSLWATRPREPA* 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17404933 17410794 + Vvi7g1127 Vvi7g1127 789993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1127 349 Coils Coil 84 111 - -
Vvi7g1127 349 MobiDBLite consensus disorder prediction 14 63 - -
Vvi7g1127 349 ProSiteProfiles DOG1 domain profile. 134 344 IPR025422 GO:0006351|GO:0043565
Vvi7g1127 349 Coils Coil 247 267 - -
Vvi7g1127 349 PANTHER TRANSCRIPTION FACTOR TGA1 1 348 - -
Vvi7g1127 349 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 68 83 IPR004827 GO:0003700|GO:0006355
Vvi7g1127 349 PANTHER TRANSCRIPTION FACTOR TGA9 1 348 - -
Vvi7g1127 349 SMART brlzneu 61 121 IPR004827 GO:0003700|GO:0006355
Vvi7g1127 349 MobiDBLite consensus disorder prediction 14 35 - -
Vvi7g1127 349 CDD bZIP_HBP1b-like 65 117 - -
Vvi7g1127 349 SUPERFAMILY Leucine zipper domain 65 107 IPR046347 GO:0003700|GO:0006355
Vvi7g1127 349 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 63 107 IPR004827 GO:0003700|GO:0006355
Vvi7g1127 349 Pfam bZIP transcription factor 64 100 IPR004827 GO:0003700|GO:0006355
Vvi7g1127 349 Pfam Seed dormancy control 151 226 IPR025422 GO:0006351|GO:0043565
Vvi7g1127 349 Gene3D - 64 113 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1127 Vvi18g346 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14994 PF14144 DOG1 1.30E-31 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1127 K14431 - vvi:100249156 674.855