Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1175 ATGAAAATAAGGAAAAAAGAAAGGGAAAAAAAAATTCACGCATCCTTTCCTATCAACCCGCTTCTTCATTTGAAACCAGACTGGAACTTCTCACTGTTTTGGAGTTGTTGGGTCTCAATGGGTCCTTTTACGTTAGCCATTGATGCGAAGAAGTCTTCACTGGCGGTTTCAGATTCATCCAATAGGAAAGTGCAAAATGCGCAGCTTGGAAAAAAGAAATTTTTTGCATCCATCAGCACGGGGGAGGAAAAAGAATTCAACTTTTTACGTGTTCTACTTGAGGGCATTGTAGCAGGAGGTACAGCTGGTGTGGTTGTTGAAACAGCTTTATACCCAATTGATACCATAAAGACTCGACTGCAGGCAGTTCGAGGAGGAGGTAAAATAGTTTGGAATGGCCTTTACTCTGGGTTGGCTGGAAACCTTGCTGGGGTCTTGCCGGCTTCTGCCATATTTGTTGGTGTTTATGAGCCTACAAAGCAAAAACTGTTACAGATATTTCCTGAAAATCTTACTGCTGTTGCTCATTTGACTGCGGGTGCCATTGGAGGGCTTGCCGCTTCTCTCGTTCGTGTTCCAACAGAGGTTGTTAAGCAAAGGATGCAGACTGGCCAATTTGCTTCAGCTCCAGATGCAGTACGCATGATCGTTTCCAAAGAGGGCTTTAAAGGTCTCTATGCTGGATATCGATCTTTTCTATTGCGAGATCTTCCATTTGATGCGATTCAGTTTTGCATTTATGAGCAGATGCGGATAGGTTACAAGTTGGCAGCAAAGAGAGATTTGAATGATCCTGAGAATGCCCTCATTGGTGCTTTTGCTGGGGCGTTAACTGGAGCTATAACTACACCCCTTGATGTGATTAAGACAAGGCTAATGGTTCAGGGACCTGCAAACCAGTATAATGGTATCATTGACTGTGTTCAGACTATTGTTAGGGAAGAAGGACCTCCTGCTCTTTTGAAGGGCATTGGACCGAGAGTACTGTGGATAGGCATTGGAGGTTCAATCTTTTTTGGTGTGCTGGAGAGGACAAAGCGGGCGCTTGCTCAGAGGCGGCCTTCACCTAATCAACACTCCGACAGCCCAAAGCAGGATTGA 1101 44.78 MKIRKKEREKKIHASFPINPLLHLKPDWNFSLFWSCWVSMGPFTLAIDAKKSSLAVSDSSNRKVQNAQLGKKKFFASISTGEEKEFNFLRVLLEGIVAGGTAGVVVETALYPIDTIKTRLQAVRGGGKIVWNGLYSGLAGNLAGVLPASAIFVGVYEPTKQKLLQIFPENLTAVAHLTAGAIGGLAASLVRVPTEVVKQRMQTGQFASAPDAVRMIVSKEGFKGLYAGYRSFLLRDLPFDAIQFCIYEQMRIGYKLAAKRDLNDPENALIGAFAGALTGAITTPLDVIKTRLMVQGPANQYNGIIDCVQTIVREEGPPALLKGIGPRVLWIGIGGSIFFGVLERTKRALAQRRPSPNQHSDSPKQD* 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 17871458 17884417 + Vvi7g1175 Vvi7g1175 790041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1175 366 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 44 359 - -
Vvi7g1175 366 Pfam Mitochondrial carrier protein 94 164 IPR018108 -
Vvi7g1175 366 Pfam Mitochondrial carrier protein 266 351 IPR018108 -
Vvi7g1175 366 Pfam Mitochondrial carrier protein 171 251 IPR018108 -
Vvi7g1175 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 253 IPR018108 -
Vvi7g1175 366 PRINTS Mitochondrial carrier protein signature 271 293 IPR002067 GO:0055085
Vvi7g1175 366 PRINTS Mitochondrial carrier protein signature 95 108 IPR002067 GO:0055085
Vvi7g1175 366 PRINTS Mitochondrial carrier protein signature 226 244 IPR002067 GO:0055085
Vvi7g1175 366 PRINTS Mitochondrial carrier protein signature 108 122 IPR002067 GO:0055085
Vvi7g1175 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 90 162 IPR018108 -
Vvi7g1175 366 Gene3D Mitochondrial carrier domain 93 362 IPR023395 -
Vvi7g1175 366 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 44 359 - -
Vvi7g1175 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 266 348 IPR018108 -
Vvi7g1175 366 SUPERFAMILY Mitochondrial carrier 95 343 IPR023395 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1175 Vvi18g90 ECH
Vvi7g1175 Vvi18g1331 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1175 K15111 - vvi:100264695 629.787