Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1224 ATGAGAGGGGTAGAAGAAAGGAGAGAGTGTGGGGAATTGACTCCTGGACCTGGCTATTTCTGGGTCTGCACCATTGGTGGAATGCTCAGTGCTGGAACCACCCATGTCGCTATCACTCCTCTTGATGTCTTAAAAGTCAACATGCAGGTATACCCCATCAAGTATAACACCATCTCCTCATGTTTTATTACCCTGTTGAGAGAACAAGGTCCTTCTGCCTTCTGGAGGGGTTGGGCCACCAAGTTCTTTGGGTATGGTGTTCAAGGTGGATTTCGATTTGGTCTATATGAATATTTCAAGAAGCTTTACTCTGATGTGCTGGTAGACCACAACCGAAGCTTCATCTTCTTTGCAAGTAGTGCATCTGCAGAAGTACTTGCCAATGTGGCTCTCTGTCCTTTTGAAGCTGTTAAAGTCCGGGTTCAAGCGCAGCCCCATTTCGCAAAGGGTTTGCTTGATGGCTTTCCAAAGCTGTATGCATCAGAAGGCCTCTATGGCTTTTACAGGGGTCTTGTTCCACTTTGGGGTCGAAACCTTCCATTCTCTATGATTATGTTCTCAACTTTTGAACATTCTGTGGATTTTCTGTACCGTAATGTTATCCATAGAAGAAAGGAGGATTGCTCAAGAGTTCAACAGCTTGGAGTTACATGTTTAGCTGGCTGTGCTGCTGGATCTGTTGCTTCCTTAATTACTAATCCTGCTGACAACATTGTTGCCTCTCTTTATAACAGAAAGGCTGATAGCCTCTTGCTGGCTGTGAAGAAAATTGGACTTATGAATTTATTTACAAGAAGTCTTCCTATTAGGATAATTCTAGTGGGGCCTGTTGTAACTTTGCAGTGGTTAGTTTATGACACCATCAAAGTCTTAAGTGGATTACCTACCAGTGGGGAAGTTCTCACTGACAAAGAAGTGAACAAAAAAGTGTAA 933 43.41 MRGVEERRECGELTPGPGYFWVCTIGGMLSAGTTHVAITPLDVLKVNMQVYPIKYNTISSCFITLLREQGPSAFWRGWATKFFGYGVQGGFRFGLYEYFKKLYSDVLVDHNRSFIFFASSASAEVLANVALCPFEAVKVRVQAQPHFAKGLLDGFPKLYASEGLYGFYRGLVPLWGRNLPFSMIMFSTFEHSVDFLYRNVIHRRKEDCSRVQQLGVTCLAGCAAGSVASLITNPADNIVASLYNRKADSLLLAVKKIGLMNLFTRSLPIRIILVGPVVTLQWLVYDTIKVLSGLPTSGEVLTDKEVNKKV* 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18407668 18411425 + Vvi7g1224 Vvi7g1224 790090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1224 310 Gene3D Mitochondrial carrier domain 22 293 IPR023395 -
Vvi7g1224 310 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 5 308 IPR044677 GO:0005315|GO:1990547
Vvi7g1224 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 195 IPR018108 -
Vvi7g1224 310 Pfam Mitochondrial carrier protein 117 199 IPR018108 -
Vvi7g1224 310 Pfam Mitochondrial carrier protein 20 104 IPR018108 -
Vvi7g1224 310 PANTHER PHOSPHATE CARRIER PROTEIN 5 308 - -
Vvi7g1224 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 291 IPR018108 -
Vvi7g1224 310 SUPERFAMILY Mitochondrial carrier 19 287 IPR023395 -
Vvi7g1224 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 18 102 IPR018108 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1224 K15102 - vvi:100249301 620.542