Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1225 ATGGCAACCAGGCTTCAGTTTGAGAACTCGTGCGAAGTTGGGGTGTTCTCCAAGCTCACCAATGCGTATTGTTTGGTTGCGATCGGTGGTTCCGAAAGCTTTTACAGTGTGTTTGAATCAGAGTTGGCTGATGTTATCCCCGTGGTTAAAACCTCGATTGGTGGTACGAGAATTATTGGTCGGCTTTGTGCTGGAAACAAAAAAGGGCTTCTCTTGCCACACACCACCACGGACCAAGAACTTCAACACCTGAGGAACAGCCTCCCTGATCAAGTTGTTGTTCAGCGTATAGAAGAGAAGCTATCTGCTCTAGGAAATTGCATAGCTTGCAATGACCATGTTGCTCTTGCACACACTGATCTTGACAGGGAAACTGAGGAGATGGTTGCAGATGTTCTTGGAGTAGAAGTTTTTAGGCAGACCATTGCTGGTAACATTCTTGTTGGTAGCTACTGCACCTTTTCCAACAGAGGTGGCTTGGTCCATCCCCATACATCCATTGAAGACTTGGATGAACTTTCAACACTCCTTCAGGTCCCTTTGGTGGCTGGGACAGTGAATCGCGGTAGTGAAGTGATAGCTGCAGGGATGACTGTTAATGACTGGACAGCATTCTGTGGATCAGACACTACAGCAACAGAACTATCTGTCATCGAGAGCGTCTTCAAATTGAGGGAGGCCCAACCTAGTGCCATTGTGGATGAGATGAGGAAATCGTTGATTGACAGCTATGTCTGA 738 47.02 MATRLQFENSCEVGVFSKLTNAYCLVAIGGSESFYSVFESELADVIPVVKTSIGGTRIIGRLCAGNKKGLLLPHTTTDQELQHLRNSLPDQVVVQRIEEKLSALGNCIACNDHVALAHTDLDRETEEMVADVLGVEVFRQTIAGNILVGSYCTFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDSYV* 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18412741 18415988 - Vvi7g1225 Vvi7g1225 790091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1225 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Vvi7g1225 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Vvi7g1225 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Vvi7g1225 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 IPR002769 GO:0042256|GO:0043022
Vvi7g1225 245 SUPERFAMILY Pentein 1 224 - -
Vvi7g1225 245 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Vvi7g1225 245 Gene3D - 1 225 - -
Vvi7g1225 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Vvi7g1225 245 TIGRFAM eIF-6: putative translation initiation factor eIF-6 4 224 IPR002769 GO:0042256|GO:0043022
Vvi7g1225 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1225 K03264 - vvi:100254404 483.026