Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1259 ATGAGAAGCCTTTCCCCTGAGCTTTTCCACGTCTGCAGTGTTGATGGTGGCTACACAAGAAGCTTGAGAAACCAGTTTCCAAAACAGAGAAACCCCCCATTACCAATACCAGTTCTCAAAAAACGGAAACGCCTTCGATTTACACACTCTTCTTTCATTTGCTCAGCAACTCTAGCAGTGATGGCAGATGAAAAAAAGAAAGTGTTCGATGTTGAAAGTGCTGCTTCATTGGTGAAGGAGCTCAGAGGGAGCTTCAATGCTGGTAAGACAAAGAGCTATGAATGGAGAATTGCACAGTTGAAGGGAATCGAGAAGATGATTGATGAGCGGGAGAAAGATATCATTGAGGCTCTTCATGAGGATCTTTCCAAACCCGAACTTGAGGCTTTTGTGTCTGAGATTTCAATGTCAAAAGGCGCGTGTAAGTTGGCTCTCAAAGAATTGGGTCATTGGATGAAGCCAGAGAAGGCCAAAACTTCAATGACAACATATCCATCATCAGCAGAAATTGTGTCAGAACCTCTTGGTGTCGTGTTGGTCATCTCAACATGGAATTATCCTTTGTTGCTATCTATTGACCCAGTGATTGGAGCTATAGCAGCTGGCAATGCTGTAGTTCTAAAACCTTCAGAAATAGCTCCAGCAACATCGACTTTGCTTTCAAAATTATTAGAGGAATATCTAGACAACTCCTCCATACGAGTTGTTGAGGGGGCTGTGGCTGAAACAACTGCCTTATTGGAGCAGAAGTGGGACAAAATATTCTACACAGGTAGTCCAAGAGTTGGACGCATAGTAATGGCTGCGGCAGCAAAGCACCTTACACCCGTAACTTTGGAACTTGGAGGAAAGTGCCCTGTTGTTGTCGACTCCAATGTCAACTTACAAGTTGCTGCGAGGAGATTAATAGCAGGAAAGTGGGCATGCAATAACGGACAAGCTTGCATTTCTCCTGATTATATTATCACGACAAAAGATTTTGCTCCAAAGTTGATAGATGTTTTGAGACATGAGCTAGAGGAATTCTTCGGGAAAAATCCAATTGAATCAGAAGACATGTCCCGCATTGTGAGTGTACAGCACTTCAAACGCCTGACAAGGCTCTTAGATGAGGATGAGGTCTCTGATAAGATCATCATTGGTGGACAAAGTGATGAGAACCAACTAAAGATAGCTCCAACCATCTTGGTGGATGTTCCTGAAGACACTGAGATCATGAAGGAGGAGATATTCGGGCCATTACTTCCCATCCTCACTGTGGAAAATCTAGAAGAGAGTTTTGACGTGATTAACTCAAAATCAAAGCCTCTTGCTGCATATCTCTTCTCTGAAAACAAACAGCTGCAGAAGGATTTTGTGAACAACATATCTGCAGGAGGAATGCTCATCAATGACACCATTCTACATCTGACTGTTTCGAGTTTACCATTTGGAGGAGTTGGGGAGAGCGGAATGGGCTCATACCATGGCAAGTTCTCCTTTGATGCATTTAGCCACAAGAAGGCAGTTCTCTACAGGGGCTTCACTGGAGAATCACCAGCAAGGTACCCACCATACACACCTGGAAAGCTAAAACTATTGAAGACTCTGACCAGTGGCAACATAGTCTCCATTCTTCTTGCCTTGCTTGGATTCTCCAAAGATTGA 1647 43.59 MRSLSPELFHVCSVDGGYTRSLRNQFPKQRNPPLPIPVLKKRKRLRFTHSSFICSATLAVMADEKKKVFDVESAASLVKELRGSFNAGKTKSYEWRIAQLKGIEKMIDEREKDIIEALHEDLSKPELEAFVSEISMSKGACKLALKELGHWMKPEKAKTSMTTYPSSAEIVSEPLGVVLVISTWNYPLLLSIDPVIGAIAAGNAVVLKPSEIAPATSTLLSKLLEEYLDNSSIRVVEGAVAETTALLEQKWDKIFYTGSPRVGRIVMAAAAKHLTPVTLELGGKCPVVVDSNVNLQVAARRLIAGKWACNNGQACISPDYIITTKDFAPKLIDVLRHELEEFFGKNPIESEDMSRIVSVQHFKRLTRLLDEDEVSDKIIIGGQSDENQLKIAPTILVDVPEDTEIMKEEIFGPLLPILTVENLEESFDVINSKSKPLAAYLFSENKQLQKDFVNNISAGGMLINDTILHLTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRGFTGESPARYPPYTPGKLKLLKTLTSGNIVSILLALLGFSKD* 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18957731 18963872 - Vvi7g1259 Vvi7g1259 790125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1259 548 Pfam Aldehyde dehydrogenase family 74 503 IPR015590 GO:0016491
Vvi7g1259 548 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 283 483 IPR016163 GO:0016620
Vvi7g1259 548 CDD ALDH_F3FHI 74 505 - -
Vvi7g1259 548 PANTHER ALDEHYDE DEHYDROGENASE 43 548 IPR012394 GO:0006081
Vvi7g1259 548 PIRSF ALDH 59 542 IPR012394 GO:0006081
Vvi7g1259 548 SUPERFAMILY ALDH-like 77 511 IPR016161 GO:0016491
Vvi7g1259 548 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 43 548 - -
Vvi7g1259 548 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 83 501 IPR016162 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1259 Vvi18g247 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1259 K00128 - vvi:100266331 1044.65