Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1265 ATGGGCGACGGAACCACCGCCACGAGCAACAGAGGAGGGGGCGGCAATGGCGGCAGCGGCAGCAACAAGCCAGCGTGGTTGCAGCAGTACGATCTGATAGGGAAAATAGGGGAGGGGACATACGGGCTGGTGTTCCTGGCTAGGACCAAGTCCCCTTCCAACAGGGGCAAGTCCATTGCCATCAAGAAATTCAAACAGTCTAAGGATGGCGATGGCGTCTCTCCCACCGCCATACGCGAAATCATGCTGCTTCGTGAAATTTCCCATGAGAATGTTGTGAAGCTTGTGAATGTGCATATCAATCATGCAGACATGTCACTCTATCTGGCTTTCGACTATGCGGAGCATGACCTTTATGAAATCATTAGACACCATAGAGACAAGGTGACCAATCCTATCCATCCATACACTGTTAAGTCATTGCTTTGGCAGCTGCTTAATGGGCTCAACTATCTCCACAGTAATTGGATCATTCATCGAGATCTAAAGCCATCAAATATCTTGGTTATGGGTGAGGGAGATGAACAGGGAGTGGTTAAAATTGCTGATTTTGGGCTTGCAAGAATATACCAAGCACCCCTGAAGCCACTATCTGATAATGGGGTGGTGGTGACCATTTGGTATCGTGCCCCTGAGTTACTACTTGGGGCAAAGCACTACACTAGCGCTGTTGATATGTGGGCTGTTGGATGCATATTTGCTGAGCTTCTGACTTTGAAGCCATTATTTCAAGGGGCAGAAGTCAAAGCGACACCAAATCCTTTTCAACTTGATCAACTTGATAAAATATTCAGGGTGTTAGGTCATCCCACACAAGAAAAGTGGCCAACACTTGTGAATCTTCCTCATTGGCAATCAGATGTACAACATATTCAGGGGCATAAATATGAGAATCCTGGGCTTTATAGTGTTGTTCATCTCCCTCTGAAGAGTGCTGCATATGATCTCCTCTCAAAAATGCTCGAATATGATCCTCGAAAGCGAATAACGGCAGCACAAGCTCTAGACCACGAGTACTTTCGTAGTGAACCTTTACCAGGGAGGAATGCACTGGTACCTAGCCAAGCAGGAGCGGAGAAAGTCATGAATTATCCTACTCGTCCAGTGGACACAACTACAGATTTTGAAGGAACAAATAGCCTTCAGACTTCTCAACCGGTATCATCGGGAAATGCAGTTTCTGGGAGCATGGCAGCTGGTCATGTGGTGCCCAATCGGTCTGTTCCTCGGCCAATGCCTGTGGTTGGGATGCAAAGAATACAAGCTCAAGGCATGTCAGCCTATAATCTCACATCCCAGGCTGCAATGGGAGGTGGAATGAATCCTGGAAGTATCCCTATGCAGCGGGGTGTTGCTGCCCAGGCCCATCAGCAACAGATGAGAAGAAAAGACCCTGGAATGGGGATGCCTGGCTACCCTCCGCAACAAAAATCAAGACGTTTCTGA 1446 47.86 MGDGTTATSNRGGGGNGGSGSNKPAWLQQYDLIGKIGEGTYGLVFLARTKSPSNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREISHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVTNPIHPYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGDEQGVVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFRVLGHPTQEKWPTLVNLPHWQSDVQHIQGHKYENPGLYSVVHLPLKSAAYDLLSKMLEYDPRKRITAAQALDHEYFRSEPLPGRNALVPSQAGAEKVMNYPTRPVDTTTDFEGTNSLQTSQPVSSGNAVSGSMAAGHVVPNRSVPRPMPVVGMQRIQAQGMSAYNLTSQAAMGGGMNPGSIPMQRGVAAQAHQQQMRRKDPGMGMPGYPPQQKSRRF* 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19079907 19094430 - Vvi7g1265 Vvi7g1265 790131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1265 481 ProSiteProfiles Protein kinase domain profile. 30 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1265 481 MobiDBLite consensus disorder prediction 1 22 - -
Vvi7g1265 481 MobiDBLite consensus disorder prediction 376 397 - -
Vvi7g1265 481 PANTHER CELL DIVISION PROTEIN KINASE 19 480 - -
Vvi7g1265 481 MobiDBLite consensus disorder prediction 452 481 - -
Vvi7g1265 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Vvi7g1265 481 SUPERFAMILY Protein kinase-like (PK-like) 26 345 IPR011009 -
Vvi7g1265 481 PANTHER CYCLIN-DEPENDENT KINASE E-1 19 480 - -
Vvi7g1265 481 ProSitePatterns Protein kinases ATP-binding region signature. 36 63 IPR017441 GO:0005524
Vvi7g1265 481 Gene3D Transferase(Phosphotransferase) domain 1 114 355 - -
Vvi7g1265 481 MobiDBLite consensus disorder prediction 376 395 - -
Vvi7g1265 481 SMART serkin_6 30 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1265 481 Pfam Protein kinase domain 30 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1265 481 Gene3D Phosphorylase Kinase; domain 1 21 113 - -
Vvi7g1265 481 CDD STKc_CDK8_like 29 340 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1265 Vvi18g35 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76743 PF00069 Pkinase 8.00E-69 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1265 K02208 - vvi:100249168 943.725