Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1277 ATGGTTTCCAAGCCCAACACGGAGGAAGAGATGGCTAAATTCGCCATTGTTCCGGCGCAGACGCGGCGGAAAGGGATCGGAATCCGGGCATGGCTGGTGGTGTTGGAGTCCGGGCAGTCGCATCTGGAGGAGCTCGGGAAGCACTCGGTGATGCGGCGGACTGGGCTGCCCGCGCGCGATCTTCGGGTTCTCGATCCGGTGTTGTCGTATCCATCCACGATACTCGGGAGGGAGAGGGCTATTGTGATCAACTTGGAGCACATCAAGGCCATTATCACCGCTAAGGAGGTGTTGATGGTGAATAGTAATAATCCTTTGATTGTGCAGTTTGTTGAGGATCTTCAGCATCGTGTCATGCCAAAACCGGCAATGGAAAGCCATGACAAAGAGATAGAGGATGCAGCTGATGCTAATTGGGGCTCACCCTCAGTACATGGTTTTAATGGTTCAGTAACAAATTCAAGAAAAAGGCCATCTCAAAGGGTTAATGTTTCCTCTGAAGTGCTGAATGTTGATGTGAAAGAAGACAGCCCTAAGACCTCAGAGGATGAACGAGTAGCTGCAGGACCAAAGGTGTTACCATTTGAGTTCAGAGCACTAGAAGCTTGTCTTGAATCGGCTTGCAGGTGCCTTGAGTCTGAGACACAAACACTGGAGCAAGAGGCGTATCCAGCATTGGATGAACTGACTTCTAATATCAGCACACTTAATCTTGAGCGTGTTAGACAGATAAAGAGTCGCTTAGTTGCAATATCTGGTCGGGTACAGAAGGTTAGAGATGAGCTTGAACATCTGCTTGATGATGACAATGATATGGCTGAGATGTTTTTGACAGAAAAGCTTGTTCGCCCCTCTTTGGATCAGTCATCAATAAAAGAGGAATTATGCAATGATGAACTCGAAGAAGATGATGAAAGGACTGAAGAATCCAAGTCTGAGAGTAACTCTGAAATCTTCAGTGGCTTTAAGCCCAATGTTGAGGAATTGGAGATGCTTTTGGAAGCCTACTTTGTACAAGTAGATGGCATCTTGCAGAAGCTGTCTGATATGAGCGAATATGTGGGTGACACTGAGGACTTCATCAATATCATGTTGGATGACAAACAAAATCAGCTGCTGCAAATGGGAGTGATGCTGAGTACAGCAAACATGATAATCAATGCTGGTATTGTGGTTGTGGGGTTGTTTGGAATGAACATAACTATCTCTCTTTTTGACGGTGGCCCGTCTACCAAATTCTTGGAAACTACCTTGGGTACATTAGGAAGTTGTGTAGCTCTATATTTAATTGCTTTTGTTTGGGGTAAGAAGAAAAAACTGTTGGGTTCATGA 1332 45.65 MVSKPNTEEEMAKFAIVPAQTRRKGIGIRAWLVVLESGQSHLEELGKHSVMRRTGLPARDLRVLDPVLSYPSTILGRERAIVINLEHIKAIITAKEVLMVNSNNPLIVQFVEDLQHRVMPKPAMESHDKEIEDAADANWGSPSVHGFNGSVTNSRKRPSQRVNVSSEVLNVDVKEDSPKTSEDERVAAGPKVLPFEFRALEACLESACRCLESETQTLEQEAYPALDELTSNISTLNLERVRQIKSRLVAISGRVQKVRDELEHLLDDDNDMAEMFLTEKLVRPSLDQSSIKEELCNDELEEDDERTEESKSESNSEIFSGFKPNVEELEMLLEAYFVQVDGILQKLSDMSEYVGDTEDFINIMLDDKQNQLLQMGVMLSTANMIINAGIVVVGLFGMNITISLFDGGPSTKFLETTLGTLGSCVALYLIAFVWGKKKKLLGS* 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19390509 19413577 - Vvi7g1277 Vvi7g1277 790143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1277 443 CDD Mrs2_Mfm1p-like 31 440 IPR039204 -
Vvi7g1277 443 MobiDBLite consensus disorder prediction 137 166 - -
Vvi7g1277 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 441 IPR039204 -
Vvi7g1277 443 Coils Coil 297 317 - -
Vvi7g1277 443 MobiDBLite consensus disorder prediction 143 166 - -
Vvi7g1277 443 Gene3D - 20 102 - -
Vvi7g1277 443 MobiDBLite consensus disorder prediction 292 319 - -
Vvi7g1277 443 Gene3D Magnesium transport protein CorA, transmembrane region 109 372 - -
Vvi7g1277 443 PANTHER MAGNESIUM TRANSPORTER MRS2-F 17 441 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1277 - - vvi:100249123 834.328