Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1286 ATGGCGACGATGGTTTGGTTCCAGTGCGTGTTTGCGGCCATCACGGTGATTCTGCTGGCGGGGTCGCTGCTGGGGAGGATGAATATAAGGGCGTGGATGATGTTTGTGCCGCTGTGGCTCACTTTTTGCTACACTGTTGGGGCCTTCAGCTTGTGGGGTGGTGGCTTCTTGTTTCATTGGGGTGTCATGGACTACTCTGGTGGTTATGTCATTCATCTTTCCTCTGGAATTGCTGGCTTCACTACTGCCTATTGGGTGGGGCCAAGATCAACCAAGGACAGGGAGAGATTCCCCCCAAATAATGTGCTGCTGATGCTGGCGGGGGCGGGGCTGCTGTGGTTGGGATGGGCCGGGTTCAACGGAGGAGACCCTTATGCGGCTAACACTGACTCTTCCATGGCAGTCCTCAACACCAACATCTGTGCCGCCACCAGCCTCCTGGTGTGGACTTGGCTTGATGTCATCTTCTTCAAGAAGCCTTCTGTCATTGGCGCCGTTCAGGGCATGATCACTGGCCTTGTCTGCATCACTCCTGCTGCAGGACTAGTTCAAGGATGGGCGGCCATAGTCATGGGCATTCTCTCCGGCAGCGTCCCATGGTTCACCATGATGATCCTCCACAAGCGCTGGACTCTTCTCCACCACATCGACGACACTCTCGGCGTCTTCCACACCCACGCCGTCGCCGGCTACCTCGGCGGCATCCTCACCGGCATCTTCGCCGAGCCCGAGCTCTGCAGCCTCTTCCTCCCCGTCACCAACTCCCGTGGCGCCGTATACGGCGGCTCTGGCGGTATCCAGGTCCTGAAGCAGCTCGCCGGCGGAGCCTTCATCATCGGGTGGAACGCGGTGGTGACTTCCATAATATGCCTTGTGGTGAGGGTGGTGCTGCCGCTGAGGATGCCGGAGGAGGAGCTGCTGATCGGCGACGACGCCGTGCACGGCGAGGAAGCGTACGCGCTGTGGGGAGATGGGGAAAAGTATGATTCGGCAAAACATGGGCTTTATTCCGATGATACTCAGCACCAAATGCCTTCCAGTGGGACCACTCAGGTAGTTTAG 1062 58.1 MATMVWFQCVFAAITVILLAGSLLGRMNIRAWMMFVPLWLTFCYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTTAYWVGPRSTKDRERFPPNNVLLMLAGAGLLWLGWAGFNGGDPYAANTDSSMAVLNTNICAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPAAGLVQGWAAIVMGILSGSVPWFTMMILHKRWTLLHHIDDTLGVFHTHAVAGYLGGILTGIFAEPELCSLFLPVTNSRGAVYGGSGGIQVLKQLAGGAFIIGWNAVVTSIICLVVRVVLPLRMPEEELLIGDDAVHGEEAYALWGDGEKYDSAKHGLYSDDTQHQMPSSGTTQVV* 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19646843 19649245 - Vvi7g1286 Vvi7g1286 790152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1286 353 PANTHER AMMONIUM TRANSPORTER 1 343 - -
Vvi7g1286 353 ProSitePatterns Ammonium transporters signature. 64 89 IPR018047 GO:0008519|GO:0016020|GO:0072488
Vvi7g1286 353 Gene3D Ammonium transporter AmtB like domains 1 322 IPR029020 -
Vvi7g1286 353 PRINTS Rhesus blood group protein signature 8 24 IPR002229 GO:0005887
Vvi7g1286 353 PRINTS Rhesus blood group protein signature 103 121 IPR002229 GO:0005887
Vvi7g1286 353 PRINTS Rhesus blood group protein signature 134 156 IPR002229 GO:0005887
Vvi7g1286 353 PRINTS Rhesus blood group protein signature 189 207 IPR002229 GO:0005887
Vvi7g1286 353 SUPERFAMILY Ammonium transporter 3 301 - -
Vvi7g1286 353 PANTHER AMMONIUM TRANSPORTER MEP2 1 343 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vvi7g1286 353 Pfam Ammonium Transporter Family 4 319 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1286 K03320 - vvi:100252515 702.975