Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1318 ATGTTGAGGTTCCATGTTGGAGGTAAAGTAGTGGAGGATGTTGATTTGTTGAGGAAGAGGCACTGGCCTTGGCGCTTGGATGTATGGCCTTTCGCCATCCTCTATACCATTTGGCTAGTAACCGTTGTTCCCAGCATTGACATATCCGACGCCATCATAGTTTTTGGTGGACTTGTGGTACTTCATATTCTGGTCTGGCTCTTCACTGCTTGGTCAGTGGAATTTAGATGCTTTGTTCAGTATAGTAAGGTTAATAGCATTCAACAAGCTGATGCTTGCAAAATAACTCCAGCAAAATTCTCTGGATCTAAGGAAATTGTACCACTTCATTTTCGTAAATTACTGGTAGGTTCTTCATCCTCAGATGTAGAAGAGATTTACTTCGATTTCAGAAAGCAATGCTTCATCTATTCAAAGGAGAAGGAGACATTCTTCAAGCTTTCTTATCCTTCCAAGGAAAGCTTCGGCTACTATCACAAAAGTACTGGACACGGCTCAGAAGCTAAAGTTGTTGCTGCTACTGAGAAGTGGGGACGGAATGTATTTGAATATCCACAGCCCACATTCCAGAAATTAATGAAAGAGAACTGTATGGAGCCATTTTTTGTTTTTCAGGTCTTCTGTGTCGGTCTCTGGTGTTTGGATGAATATTGGTATTACAGTTTGTTTACCCTATTCATGCTATTTATGTTTGAATCTACAATGGCAAAAAGTCGGCTAAAGACTCTAACTGAGCTCAGACGTGTAAGAGTGGACAATCAGACGATCATGGTGCATCGCTGTGGGAAGTGGGTGAAGCTCTCTGGGACAGAACTTCTCCCAGGGGATGTTGTCTCCATTGGACGCTCTTCTGGCCAGAATGGAGAGGATAAGACTGTACCAGCTGACATGCTTATATTAGCTGGAAGTGCTATTGTGAATGAAGCCATTCTTACAGGCGAATCTACCCCCCAATGGAAGGTATCAATCATGGGTAGGGGAAATGAGGAGAAGTTATCAGTGAAGCGAGATAAAAACCATGTCCTTTTTGGTGGGACAAAGATATTGCAGCATACTCCTGATAAGACCGTTCATCTTAAAACCCCAGATGGGGGCTGCTTGGCTGTTGTTCTACGAACTGGCTTTGAAACAAGTCAAGGAAAACTGATGCGGACCATTTTATTTTCAACAGAGAGGGTTACTGCTAACAGCTGGGAAAGCGGGCTCTTCATTTTGTTCTTAGTCATATTTGCAGTAATAGCTGCCGGTTATGTGCTCAAAAAGGGCCTAGAAGATCCAACAAGAAGTAAATACAAGCTTTTCTTGAGTTGTTCATTGATTATTACGTCTGTGATCCCCCCTGAGTTGCCAATGGAGTTATCAATAGCTGTTAATACATCTTTGATTGCATTGGCACGGCGTGGGATATTTTGTACGGAACCTTTTCGAATTCCATTTGCTGGAAAAGTTGACATATGTTGTTTTGATAAGACTGGAACACTTACATCAGATGACATGGAGTTCCGTGGAGTCACTGGGTTGACGGATGCTGCAGATCTAGAGTCAGATATGAGTAAAGTGCCTGCCCGCACTGTTGAAATTTTGGCTTCCTGTCATGCCTTGGTGTTTGTGGACAACAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCCCTTAAAGGAATAGATTGGTCTTACAAATCTGATGAGAAGGCTGTGCCCAAAAAGGGAAGCGGCCAAGCTGTGCAAATTGTTAAGAGACACCACTTTGCCTCTTACTTGAAACGAATGTCAGTTGTTGTTCGCGTTCAGGAGGAATTCCTTGCTTTTGTGAAGCTTAACAAAAATCGTTTTCCAAACAACTTCCAATATACACACACATTAAAAAAAGGGGAACCAACCTGGGGTGATACGTTAGAACTCCACACACTGGTGATGGAAATGTTGATCATTGCACACAGTGCCTTGAAGTATGATTTAATTGAAATGACTTCTTTTAGAAATCTTTCATATAGGAACATCCTCCCTATCCTCTCTTACAGCAAAATTTTAGATGCAAACCATGAATATTTCCATCAGCTTGATCTCCTTACACCAGACATCATACCAAGATTTAGTCACACAATTCCCCATGAGAATCCTAATTCAAAAGGTAAGAGAGTGAGTCTTGCTGCTTTGGAAGATGTTGCTCATCGAAGAGTTCCACCACTGTTTAATATCAGTAGTGTCCTTATGCGGCAAACTCATGTAATTAGATGTGTATTGTCAGAAATGTTAAGTCATGCTCATTTATTTTCAGAATTTCCTGAGGTGGAAGGTCTTTTCACTTTTGCTTTTGTGGCCAGTACCACATTTAAGGCTCTCATTGCTAGATACATGTTGCTTCAGTTGATGTTAATCAACATTATTTTATTTATGGCATCTCATATTTTTTCTTCTTTTGGCTTGTTTCCTCTGTTTTCTGGGGCTCCAGAAACTATTCAGGAGAGGCTTGTTGATTTGCCACCTTCCTATGTTGAGACCTACAAGAAATACACGCGTCAAGGATCTCGTGTTTTGGCCCTTGCTTTCAAGTCCCTTCCAGAAATGACAGTTAGTGAAGCTAGGAACATGGATAGAGATGTGGTGGAGAGTGGCCTTACCTTTGCAGGTTTTGCGGTATTTAACTGTCCTATTAGAGCAGATTCAGCTACTGTTCTGTCTGAATTAAAAGGATCATCCCATGACTTGGCAATGATTACTGGTGATCAAGCTTTGACAGCTTGTCATGTTGCTGGCCAAGTTCATATTATTTCAAAGCCAACATTAATTCTTGGTCCAGCAAGGAATAGTGAAGGATACGAGTGGATTTCACCAGATGAAACTGAGATAATTCGCTACAGTGCGAAAGAGGTTGAAGCTTTATCAGAAACCCATGATCTCTGCATTGGAGGTGACTGCTTCGAAATGTTACAACAGACTTCTGCTGTTCTACAAGTCATTCCCTTTGTGAAGGTATTTGCAAGGGTTGCTCCTGAGCAAAAGGAACTTATATTGACCACTTTCAAAACAGTGGGAAGGATGACATTGATGTGTGGTGATGGAACCAATGATGTTGGAGCTCTGAAACAGGCCCATGTAGGAGTTGCTTTATTGAATGCTATGCCACCAACTCAAACTGGAGGATCTTCCTCAGAAGCATCTAAAGATGAAACTAGCAATCTGAATGGAGAAGGCCCTTCAAAAGGCAGATCTGCCTCAAAAAGCTGA 3225 41.8 MLRFHVGGKVVEDVDLLRKRHWPWRLDVWPFAILYTIWLVTVVPSIDISDAIIVFGGLVVLHILVWLFTAWSVEFRCFVQYSKVNSIQQADACKITPAKFSGSKEIVPLHFRKLLVGSSSSDVEEIYFDFRKQCFIYSKEKETFFKLSYPSKESFGYYHKSTGHGSEAKVVAATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDNQTIMVHRCGKWVKLSGTELLPGDVVSIGRSSGQNGEDKTVPADMLILAGSAIVNEAILTGESTPQWKVSIMGRGNEEKLSVKRDKNHVLFGGTKILQHTPDKTVHLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVIFAVIAAGYVLKKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVTGLTDAADLESDMSKVPARTVEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAVPKKGSGQAVQIVKRHHFASYLKRMSVVVRVQEEFLAFVKLNKNRFPNNFQYTHTLKKGEPTWGDTLELHTLVMEMLIIAHSALKYDLIEMTSFRNLSYRNILPILSYSKILDANHEYFHQLDLLTPDIIPRFSHTIPHENPNSKGKRVSLAALEDVAHRRVPPLFNISSVLMRQTHVIRCVLSEMLSHAHLFSEFPEVEGLFTFAFVASTTFKALIARYMLLQLMLINIILFMASHIFSSFGLFPLFSGAPETIQERLVDLPPSYVETYKKYTRQGSRVLALAFKSLPEMTVSEARNMDRDVVESGLTFAGFAVFNCPIRADSATVLSELKGSSHDLAMITGDQALTACHVAGQVHIISKPTLILGPARNSEGYEWISPDETEIIRYSAKEVEALSETHDLCIGGDCFEMLQQTSAVLQVIPFVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNAMPPTQTGGSSSEASKDETSNLNGEGPSKGRSASKS* 1075
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20243490 20280140 + Vvi7g1318 Vvi7g1318 790184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1318 1074 PRINTS P-type cation-transporting ATPase superfamily signature 307 321 - -
Vvi7g1318 1074 PRINTS P-type cation-transporting ATPase superfamily signature 487 501 - -
Vvi7g1318 1074 PRINTS P-type cation-transporting ATPase superfamily signature 898 908 - -
Vvi7g1318 1074 PRINTS P-type cation-transporting ATPase superfamily signature 1017 1036 - -
Vvi7g1318 1074 MobiDBLite consensus disorder prediction 1041 1074 - -
Vvi7g1318 1074 ProSitePatterns E1-E2 ATPases phosphorylation site. 489 495 IPR018303 -
Vvi7g1318 1074 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 402 512 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi7g1318 1074 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 989 1036 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi7g1318 1074 PANTHER CATION-TRANSPORTING ATPASE 1 605 - -
Vvi7g1318 1074 PANTHER CATION-TRANSPORTING ATPASE 809 1051 - -
Vvi7g1318 1074 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 605 - -
Vvi7g1318 1074 PANTHER CATION-TRANSPORTING ATPASE-RELATED 809 1051 - -
Vvi7g1318 1074 Gene3D - 224 387 - -
Vvi7g1318 1074 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 40 604 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Vvi7g1318 1074 Pfam E1-E2 ATPase 254 467 - -
Vvi7g1318 1074 MobiDBLite consensus disorder prediction 1039 1074 - -
Vvi7g1318 1074 Gene3D - 872 1050 IPR023214 -
Vvi7g1318 1074 SUPERFAMILY HAD-like 482 1043 IPR036412 -
Vvi7g1318 1074 ProSitePatterns Hypothetical cof family signature 2. 1017 1039 - -
Vvi7g1318 1074 SUPERFAMILY Calcium ATPase, transmembrane domain M 151 812 IPR023298 -
Vvi7g1318 1074 Gene3D - 491 606 IPR023299 GO:0000166
Vvi7g1318 1074 SUPERFAMILY Calcium ATPase, transduction domain A 253 386 IPR008250 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1318 K14950 - vvi:100257916 1217.99