Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1330 ATGGTAGTCTCTAATTTTTTTGGCATATTATTGGTGATGGAGGTGATGGTATTCTATGGTTTGAGGCTTGGAGTTCATGGGTTGAGCATGGATTACTATATGATGAATTGCCCAATTGCTGAATTTATTGTGAGGGATTCAGTCACCAGCGCTTTGCAGTCCGACCCAACTCTTGCTGCAGGCCTCGTCCGGATGCATTTCCACGACTGTTTCATACAGGGATGTGATGGATCGGTTCTCCTTGATTCCACGAAAGACAACACCGCAGAAAAGGATTCCCCAGCGAATCTGAGCCTGCGAGGGTACGAACTCGTAGATGATATAAAGGATGAACTTGAAAACCGATGCCCTGGTGTGGTCTCCTGCGCTGATATCCTTGCAATGGCGGCCAGGGATGCTGTTTTTTGGGTTGGAGGTCCGTTCTATCAAATCCCAAATGGACGAAAAGATGGTAGAAGGTCTAGAATCGAAGACACCTTTAACCTCCCTGCTCCAGTCCTCAATAGCACGGAGCTCATCAACTTGTTTGGGAAGCATGGCTTCAATGTTCAAGAAATGGTGGCTTTATCAGGGGCGCATACAATAGGAGTTGCGAGGTGCTCATCATTCAAATCCCGGTTGAGTAACTTCGACTCCACTCATGACACGGATCCCAGCATGAACTCCAACTTTGCCAGGGTCTTGTCCAAGACGTGTGCTGCCGGAGACAACGCCGAGCAGCCGCTGGATCCCTCCAGAAACACATTTGATAACGCCTACTACATTGCGCTGCAGCGGCAAGCGGGGGTGCTGTTTTCCGACCAATCCTTGTTCACCAGCGCTAGGACTAGGCGTATAGTCAACGCCTACGCCATGAACCAAGTCATGTTTGCCATGGATTTCCAGCAGGCAATGCTGAAGATGGGGCTGCTTGATGTCAAGGAAGGTTCCACCGGAGAAGTTAGAGAAAATTGCCGGAAAATTAACTGA 969 49.02 MVVSNFFGILLVMEVMVFYGLRLGVHGLSMDYYMMNCPIAEFIVRDSVTSALQSDPTLAAGLVRMHFHDCFIQGCDGSVLLDSTKDNTAEKDSPANLSLRGYELVDDIKDELENRCPGVVSCADILAMAARDAVFWVGGPFYQIPNGRKDGRRSRIEDTFNLPAPVLNSTELINLFGKHGFNVQEMVALSGAHTIGVARCSSFKSRLSNFDSTHDTDPSMNSNFARVLSKTCAAGDNAEQPLDPSRNTFDNAYYIALQRQAGVLFSDQSLFTSARTRRIVNAYAMNQVMFAMDFQQAMLKMGLLDVKEGSTGEVRENCRKIN* 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20506448 20508060 - Vvi7g1330 Vvi7g1330 790196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1330 322 ProSiteProfiles Plant heme peroxidase family profile. 27 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vvi7g1330 322 CDD secretory_peroxidase 27 321 IPR033905 GO:0004601|GO:0042744
Vvi7g1330 322 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PANTHER PEROXIDASE 47 21 320 - -
Vvi7g1330 322 PANTHER PEROXIDASE 25-RELATED 21 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vvi7g1330 322 SUPERFAMILY Heme-dependent peroxidases 27 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 Gene3D - 31 322 - -
Vvi7g1330 322 Gene3D Peroxidase, domain 2 163 301 - -
Vvi7g1330 322 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi7g1330 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1330 K00430 - vvi:100261264 647.506