Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g175 ATGGTTTACCTTAGCACATTTGTTGCAGTCTGTGGTTCTTTCGAATTTGGATCCTGTGCAGGTTATTCATCCCCTACTCAAACGGCTATCAGAGAAGATCTTGATCTCTCACTAGGAGAGTACTCAGTGTTTGGGTCCATATTGACTTTTGGTGCAATGATTGGGGCAATTACAAGTGGACCTATTGCTGACTTCATTGGTAGGAAAGGGGCAATGAGAGTATCATCTGCTTTCTGTGCTGCAGGGTGGCTTGCAATTTACTTTGCTGAGGGTGCTCTGGCTCTGGACATTGGAAGATTGGCAACAGGATATGGAATGGGAGTCTTTTCCTATGTGGTACCTGTGTTTATAGCTGAAATTGCACCAAAGAATCTTCGAGGAGCGTTGACAACTTTAAATCAGCTCATGATCTGTACTGGAGTGTCTGTTGCCTTCATAATAGGGACGGTACTAACATGGAGGGTTTTAGCACTAACAGGACTAGTCCCATGTGCTGTTGTGCTTTTCGGTCTCTTTCTCATTCCAGAATCTCCTAGATGGCTGGCAAAAACAGGACGTGAAAAAGAATTTGAAGCTGCACTGCAGAGACTTCGTGGCAAGGATGCTGATATATCTCTTGAGGCAGCTGAAATCCAGGATTATATAGAAACTCTGCAACAGCTCCCAAAAGCCAAAATTATGGATTTGTTTCAAAGAAGATACTTGCCTTCAGTCATTATAGGAGTTGGCTTGATGTTCTTTCAGCAATTTGGGGGAATCAATGGAATCTGCTTCTACGTGAGCAATATTTTTGAGTCAGCAGGATTTTCTTCCAGTGTTGGAACTATAACCTACGCTATTCTTCAGGTCATAGTGACTGCAATGGGTGCAGCCCTGATTGATAGAGCTGGAAGAAAACCTCTTTTATTGGTTTCTGCATCAGGATTGGTCCTAAGCTGTGTACTAGCAGGGCTTTCCTTCTATTTCAAGAGTCATGAATTGGCACTAAAGGCAGCTCCTGCACTTGCTGTAACTGGCATCCTGCTGTACATAGGATCCTTCTCAGTAGGAATGGGAGCAGTTCCTTGGGTTGTCATGTCCGAGATATTCCCTATAAATATTAAAGGAGTGGCTGGAAGCCTGGCTACACTAATGAACTGGTTTGGTGCATGGGCAATTTCCTACACTTTCAACTATCTTATGTCCTGGAGTTCATATGGTACCTTCATTATTTATGGTGTTATTAATGCACTAGCCATTGTATTTGTGGTCAAGGTGGTGCCTGAAACAAAGGGGAGAACTCTGGAACAAATCCAGGCTACCATTAATGCATGA 1314 43.3 MVYLSTFVAVCGSFEFGSCAGYSSPTQTAIREDLDLSLGEYSVFGSILTFGAMIGAITSGPIADFIGRKGAMRVSSAFCAAGWLAIYFAEGALALDIGRLATGYGMGVFSYVVPVFIAEIAPKNLRGALTTLNQLMICTGVSVAFIIGTVLTWRVLALTGLVPCAVVLFGLFLIPESPRWLAKTGREKEFEAALQRLRGKDADISLEAAEIQDYIETLQQLPKAKIMDLFQRRYLPSVIIGVGLMFFQQFGGINGICFYVSNIFESAGFSSSVGTITYAILQVIVTAMGAALIDRAGRKPLLLVSASGLVLSCVLAGLSFYFKSHELALKAAPALAVTGILLYIGSFSVGMGAVPWVVMSEIFPINIKGVAGSLATLMNWFGAWAISYTFNYLMSWSSYGTFIIYGVINALAIVFVVKVVPETKGRTLEQIQATINA* 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1976365 1981277 - Vvi7g175 Vvi7g175 789041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g175 437 Gene3D MFS general substrate transporter like domains 1 436 IPR036259 -
Vvi7g175 437 PANTHER - 1 435 - -
Vvi7g175 437 SUPERFAMILY MFS general substrate transporter 7 432 IPR036259 -
Vvi7g175 437 Pfam Sugar (and other) transporter 7 433 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vvi7g175 437 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 424 IPR020846 GO:0022857
Vvi7g175 437 ProSitePatterns Sugar transport proteins signature 1. 289 306 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vvi7g175 437 ProSitePatterns Sugar transport proteins signature 1. 59 76 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vvi7g175 437 PRINTS Sugar transporter signature 96 115 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi7g175 437 PRINTS Sugar transporter signature 248 258 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi7g175 437 PRINTS Sugar transporter signature 337 358 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi7g175 437 PRINTS Sugar transporter signature 360 372 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi7g175 437 CDD MFS_GLUT6_8_Class3_like 3 430 IPR044775 GO:0008643|GO:0051119
Vvi7g175 437 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 1 435 - -
Vvi7g175 437 TIGRFAM SP: MFS transporter, sugar porter (SP) family 3 431 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g392 Vvi7g175 ECH
Vvi5g393 Vvi7g175 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g175 K03444 - vvi:100263109 846.654