Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g2 ATGGGTTGCAGCGGCGGAGTCAGAGCCATATCCCTTGCCAAACACCTCCTTCAGGTGCACCATAACTCCTATGCACTAGTGCTGAGTACAGAGAACATCACCCCAAATTGCTACATGGGCCATGATCGATCCAAGATTCTTATCAACTGCCTGTTCCGTGTGGGCGCGGCCGCCATCCTCCTCTCCAACCGGCCTTCCGACCGCCGCTGCTCAAAGTACCAGCTCATCCACACCGTCGACACCCACACGGCAAGCTCCGACCGTTCCTACAACTGCATATTCCAAGAAGAGGACCATGAAGGCCACATGGGCGTCACCGTCAGCAAAGATCTCCTGGCCGTCGCCACCATAGCCATCAACTCCAACTTAGCCGCACTGGGCCGCCTGATCCTCCCGGCATCGGAAAAGCTCCGATTTCTTGCAAACTACATAATCCGATACTTCCACGTGGCAAACATCGAGCCGTACGTGCCAAATTTCAAGAGCGCGTTTGATCACTTTCTTCCCCATCCTGGTGGGAAGCCTGTACTGGACGAAGTGGAGAGAAACCTGAAAATAAGTGAGACCCAAATGGAAGCATCTAGAATGACACTGTATAGATTTGGAAATGTCTCCAGTAGTACAGTGTGGTATGAGCTAGCCTACACCGAGGCCAAGGGTAGGGTTAAGAGGGGTGATCGTGTGTGGCAGATTGCATTTGGGTCGGGGTTCAAGTGCACTAGTCTCATCTGGAAGGCGATGAGGACCGTTGATAGTCGGGAAAAAATGAATCCTTGGAGCGATGAGATTGATGAGTTTCCAGTGGTGCAGCCGCAGAGCACAGGATCATTCTCCTTCTTTTTTGAGTCTAATAAATCAATAATTATAATAATAAAAGATGGCTAA 885 50.73 MGCSGGVRAISLAKHLLQVHHNSYALVLSTENITPNCYMGHDRSKILINCLFRVGAAAILLSNRPSDRRCSKYQLIHTVDTHTASSDRSYNCIFQEEDHEGHMGVTVSKDLLAVATIAINSNLAALGRLILPASEKLRFLANYIIRYFHVANIEPYVPNFKSAFDHFLPHPGGKPVLDEVERNLKISETQMEASRMTLYRFGNVSSSTVWYELAYTEAKGRVKRGDRVWQIAFGSGFKCTSLIWKAMRTVDSREKMNPWSDEIDEFPVVQPQSTGSFSFFFESNKSIIIIIKDG* 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 54207 55617 + Vvi7g2 Vvi7g2 788868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g2 294 SUPERFAMILY Thiolase-like 75 248 IPR016039 GO:0016746
Vvi7g2 294 Gene3D - 1 246 IPR016039 GO:0016746
Vvi7g2 294 Pfam Chalcone and stilbene synthases, C-terminal domain 167 244 IPR012328 -
Vvi7g2 294 PANTHER 3-KETOACYL-COA SYNTHASE 1 272 IPR012392 GO:0006633|GO:0016020|GO:0016747
Vvi7g2 294 Pfam FAE1/Type III polyketide synthase-like protein 1 146 IPR013601 GO:0006633|GO:0016020|GO:0016747
Vvi7g2 294 PANTHER 3-KETOACYL-COA SYNTHASE 2-LIKE 1 272 - -
Vvi7g2 294 CDD CHS_like 1 244 - -
Vvi7g2 294 Coils Coil 177 197 - -
Vvi7g2 294 SUPERFAMILY Thiolase-like 1 70 IPR016039 GO:0016746
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g598 Vvi7g2 ECH
Vvi5g590 Vvi7g2 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g2 K15397 - vvi:100263120 577.015