Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g252 ATGTCTTCTGATGTGGTAAACAGCCCTGACGGGACCCATGATCAAGGCCTCACATCAAAGAAACTCTCATGGGGAAAACTACGTCGTATGGACTCCTTAGATATGGAGTCCGGGACTGTCCATGGCCATAGCCACCATGGCTCCAGGGGCACCAAGAACTGGTCTGTGATACTGCACCTGGCGTTTCAGAGCATTGGAATAGTGTATGGGGACATTGGAACTTCGCCTTTGTACGTGTATGCAAGCACTTTCACTGATGGTGTCAAACATAATGATGATATTCTGGGGGTTCTTTCTCTCATCTTCTACACCCTCACCCTCATCCCTCTCTTCAAGTACGTCTTGATTGTTTTGAAGGCCAACGATAATGGCGATGGAGGGACATTTGCTTTGTATTCTCTTATATGCCGATATGCCAAGGTGGGGTTGATCCCTAGTCAACAGGCTGAGGACAGAGAAGTCTCCAATTTCCGGTTGGAGCTGCCTAGTAAAAGCCTGCAGAGGGCATCAAAGCTCAAGTCTAAGCTAGAGAAGAGCAACTTTGCTAAGTTCTTTCTGTTGTTTGCTACAATGCTTGGCACTTCCATGGTGATTGGTGATGGTGTCCTCACTCCTTGCATCTCAGTTTTATCTGCTGTGGATGGCATCAAGGCAGCCACAGATTCAATGACGGAAGATAGGATTGTTTGGATATCGGTAGCCATCTTGGTATGCCTCTTCATGGTACAAAGATTTGGAACTGACAAAGTTGGCTACAGTTTTGCTCCAATAATCTGTGTTTGGTTCGCATTAATTGGTGGCATTGGGGTCTACAACTTCATCAAGTTTGATCCAACAGTCGTTAAAGCCATTAATCCCAAGTACATCATCGATTACTTCACAAGGAACAAGAAACAAGCCTGGATTTCCCTTGGTGGGATCGTTCTCGCCATTACAGGGACGGAGGCGCTGTTTGCTGATGTTGGCCACTTCACAGTTCAATCGATACAGTTAAGTATGTGCACTGTCACATACCCTGCTCTTGTATTGGCATACACTGGACAAGCCTCTTTTCTCCGGAAACACCATGAGGATGTTGGTGATCTTTTCTTCAAGTCCATACCACATCGTCTGTACTGGCCGATGTTTGTTGTGGCTGTGTCCGCGTCGATCATTGCTAGTCAAGCAATGATTTCTGGGACTTTCTCCATAATTCAGCAGTCACTCTCATTGGGGTGTTTTCCTCGAGTAAAGATTGTGCATACATCAACTAAGTATGAAGGGCAAGTGTACATTCCTGAGGTCAATTACCTTCTCATGCTGGCTTGTGTAGGGGTCACTCTCGGGTTCAAGACTACTACAAAGATTGGAAATGCATATGGGATTGCGGTGGTGTTCGTGATGACCCTCACCTCATCATTTCTGGTTCTTGTGATGATCATGATATGGAAAACCCATATCCTTCTTGTGATCTCATATGTTGTGGTCATTGGTAGCATTGAGCTTCTGTATCTAAGTTCAGTCCTTTACAAGTTTGATCAAGGCGGGTATCTACCCTTGGCCTTTGCCTTAGTTCTGATGACCATAATGTACATTTGGAATGATGTGTACCGGAGGAAATACTATTATGATCTGGATCACAAGATTTCTCCTGAGATGGTGAAGGAATTAGTAGCGAGCACACACTTTAGTAGAATACCAGGACTGGCCATCTTCTACTCTGAGCTTGTTCATGGCATCCCGCCCATCTTCAAGCATTACATGGAAAATGTGCCTGCCTTGCATTCAGTTCTTGTTTTCGTCTCAATCAAGTCTCTCCCCATAAGCAAGGTTCCAATGGAGGAACGATTCCTCTTCCGCAGGGTAAACCCAGACGATCTTTATGTGTTTCGGTGTGTGGTGAGGTATGGGTACACTGACGTGCGATCCGAGGAAGAGCCTTTTGAGAGATTGCTGGTTGAAAGATTGAAGGAGCGCCAAGAGGATGTTGACAAAGATATTGAAGCAATTGATAGAGCGGCACGAGCTGGTGTGGTGCACTTCATCGGTGAGAATGAGGTGATTGCAGAGAAGGGCTCCAAATTAGGGAAAAAAGTTTTGATAAATGTTGGCTATAATATCTTGAAGAAGAATTTGAGACAGACAGAAAAGGTGTTTGACATTCCACACAAACGTATGTTGAAAGTGGGAATGATCTATGAGCTTTGA 2187 44.99 MSSDVVNSPDGTHDQGLTSKKLSWGKLRRMDSLDMESGTVHGHSHHGSRGTKNWSVILHLAFQSIGIVYGDIGTSPLYVYASTFTDGVKHNDDILGVLSLIFYTLTLIPLFKYVLIVLKANDNGDGGTFALYSLICRYAKVGLIPSQQAEDREVSNFRLELPSKSLQRASKLKSKLEKSNFAKFFLLFATMLGTSMVIGDGVLTPCISVLSAVDGIKAATDSMTEDRIVWISVAILVCLFMVQRFGTDKVGYSFAPIICVWFALIGGIGVYNFIKFDPTVVKAINPKYIIDYFTRNKKQAWISLGGIVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALVLAYTGQASFLRKHHEDVGDLFFKSIPHRLYWPMFVVAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKIVHTSTKYEGQVYIPEVNYLLMLACVGVTLGFKTTTKIGNAYGIAVVFVMTLTSSFLVLVMIMIWKTHILLVISYVVVIGSIELLYLSSVLYKFDQGGYLPLAFALVLMTIMYIWNDVYRRKYYYDLDHKISPEMVKELVASTHFSRIPGLAIFYSELVHGIPPIFKHYMENVPALHSVLVFVSIKSLPISKVPMEERFLFRRVNPDDLYVFRCVVRYGYTDVRSEEEPFERLLVERLKERQEDVDKDIEAIDRAARAGVVHFIGENEVIAEKGSKLGKKVLINVGYNILKKNLRQTEKVFDIPHKRMLKVGMIYEL* 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2728561 2734306 - Vvi7g252 Vvi7g252 789118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g252 728 Coils Coil 646 666 - -
Vvi7g252 728 TIGRFAM kup: potassium uptake protein 60 727 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi7g252 728 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 653 727 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi7g252 728 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 24 652 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi7g252 728 Pfam K+ potassium transporter 61 633 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi7g252 728 PANTHER POTASSIUM TRANSPORTER 24 652 - -
Vvi7g252 728 PANTHER POTASSIUM TRANSPORTER 653 727 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g252 K03549 - vvi:100232991 1396.33