Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g27 ATGGGTCGAGACGGGTTTGTCGTTCCCGGGGATATTCAACTGGCTTCGAAGAAGAAGACCGCCGTTAGTAGTTGGGTTTTGATGAATGACAATGGGGAGAGTACAATTCTGGATGTGGACAAGTATGTCATCATGCGCCGCGTGCATATTCATGCCAGAGATCTGCGCATTCTTGATCCTCTCTTGTCATATCCTTCGACCATTCTTGGAAGAGAAAGAGCTATTGTTCTCAATTTGGAGCACATCAAAGCAATTATCACAGCAGATGAGGTATTGCTTCGAGATCCGATGGATGATAATGTTATTCCTATTGTTGAGGAGCTCCAAAGGCGGTTGCCAGCAGTAAGTACCAGTTTCCAAGGCCAAGGAGAAGAGGAAGACCTTGGAGCGCAAAATGATGCTGAAGCTGCTGAAGAAAATGAATTTCCATTTGAATTCCGGGCTCTTGAAGTAGCACTAGAAGCCATCTGTAGCTTTCTTGATGCGCGGACAAGGGAGCTGGAAACTGCTGCTTACCCAGCTTTAGATGAGCTAACCTCCAAGATTAGCAGTCGTAATTTGGATCGGGTTCGTAAATTGAAGAGTGCCATGACAAGGTTGACCAATCGGGTTCAGAAGATGCTTTTGGTTCCAGGTAAGAGATGA 645 45.89 MGRDGFVVPGDIQLASKKKTAVSSWVLMNDNGESTILDVDKYVIMRRVHIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITADEVLLRDPMDDNVIPIVEELQRRLPAVSTSFQGQGEEEDLGAQNDAEAAEENEFPFEFRALEVALEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKMLLVPGKR* 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 335948 340047 + Vvi7g27 Vvi7g27 788893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g27 214 CDD Mrs2_Mfm1p-like 25 207 IPR039204 -
Vvi7g27 214 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 207 IPR039204 -
Vvi7g27 214 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 5 207 - -
Vvi7g27 214 Gene3D Magnesium transport protein CorA, transmembrane region 103 209 - -
Vvi7g27 214 Gene3D - 11 96 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g27 K16075 - vvi:100246066 383.259