Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g28 ATGGCAGACCTGTACTTATCAAGAAAATTGACTAGGGCTTCTTCATCATCCAGTGGTTCTGGTGCTCCCCTCTGGTTGCTTGCATCTCCTACAATAGGCTCAAGGATATCCAGAACAAGTAGAGCAAGTGCAGTAACAACTCATGAGGAGAATGACGTTGAGGAGCTGGAGATGTTGCTTGAGGCTTACTTTATGCAAATTGACGGCACATTGAATAAATTATCCACGCTGCGTGAATACATTGATGACACTGAAGACTACATTAATATTCAGCTTGACAATCATCGAAACCAGCTGATTCAGCTTGAGCTCTTTCTAAGTTCTGGAACTGTCTGTTTGTCTATATATTCTTTGGTGGCTGCTATATTTGGCATGAACATCCCATATACATGGAGGAACGACCATGGATACATGTTCAAATGGGTGGTCATCCTCTCAGGAATGGCTTGTGCATCCATTTTCTTGTCAATAATTTCATATGCTCGGAGCAAAGGTCTTGTTGGGTCTTGA 510 42.35 MADLYLSRKLTRASSSSSGSGAPLWLLASPTIGSRISRTSRASAVTTHEENDVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVAAIFGMNIPYTWRNDHGYMFKWVVILSGMACASIFLSIISYARSKGLVGS* 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 340048 341582 + Vvi7g28 Vvi7g28 788894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g28 169 Pfam CorA-like Mg2+ transporter protein 50 155 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi7g28 169 Gene3D Magnesium transport protein CorA, transmembrane region 1 99 - -
Vvi7g28 169 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 169 - -
Vvi7g28 169 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 105 155 IPR045863 -
Vvi7g28 169 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 169 IPR039204 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g28 K16075 - vvi:100246066 325.865