Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g312 ATGGCTTGGGTACATGAGCAATTACCAGGGAACATTCTTGAAGCTTATAATATTTCTGTGCGTGAAAAATGTGAAAGCTACTTACTTTTTTCTGGTGAAACGTCCCTTGGAGATGGATTTCGAACCTTCTTGTATTTTCTTGGTCTCGCATATTGTTTTATTGGATTATCAGCTATAACTGCCCGTTTTTTCCAGTCTATGGAGAATGTTGTTAAGCACAAACGGAAAGTGGTGAAGATAGATCCTAGATCAAATACAGAGATTAGACATGAGAAGGTGTGGAATTACACAATTGCAGACATCACTCTATTAGCCTTTGGCACTAGCTTCCCTCAGATCTCTCTAGCTATTATCGATTCTATACAAAACCTTGGGAGCCGGTATGCTGGAGGTTTGGGTCCTGGAACACTTGTCGGTTCTGCTGCATTCGATCTATTTCCCATCCATGCTGTTTGTGTTGTAGTTCCAAAAGCTGGGGAATTAAAAAAGATCTCTGATGTAGGAGTTTGGCTTGTAGAGCTCTTTTGGTCCTTTTGGGCTTATGTCTGGTTATACATAATCTTGGAGGTATGGACCCCAAATGTGATTACAATTTGGGAGGCGTTGTTGACAGTGCTGCAATTTGGATTACTACTGATACATGCTTATGCTCAAGACAAGCAGTGGCCCTACTTATCTCTTCCTTTGCCAAGAACTGAGAGGCCAGAGGACTGGGTTCCTGATGAGGCTGCTTCACGCAAACAAGACAAAATTGCTGGTGATGAGTGCTCTGAGTTATTTCAAGAAAATGGGAACATTGTTGATATTTTCTCCATCCATTCAGGAGATGGGTCAGTGTATCACAGGATCTCTGGCAGTGAAGTTGCTGAACCCTCCAATGAACATTTTCAGAAAAACATTATTTTAGAAGATTCTCATTTGCTATCACTCTGGAAGCAGCAATTTGTGGATGCTTTTACGTTGGAAAGCTCAGAATCAAGAAAATTGGACAACATCTATCTATGGGTAGCTAGAATTTTCTGGCAGTTGCTGCTTTTGCCTTGGAGATTTCTGTTCGCTTTTGTGCCTCCTCCTCATATTGCTCATGGATGGTTTGCCTTCATTTGCTCTCTAATTTTCATCAGTGGGATAGCCTACATTGTAACCAAGCTTACAGATCTAATAAGCTGTACCTCAGGAATAAATTCTTATGTCATAGCATTCACAGCATTAGCAGCTGGAACTTCATGGCCAGATCTAGTGGCTAGCAAGATTGCTGCTGAACGCCAAACAACAGCAGATTCTGCCATTGCAAACATCATTTGCAGCAATTCTGTGAATATATATATGGGCATTGGCATTCCATGGCTGATTAACACAACATACAATTTCATTGCCTACCGGGAGCCATTAGGGGTTCAAAATGCAGAAGGGCTTAGCTTCTCTCTGCTTGTTTTCTTCTGTACTTCTATATGCTGTATTGGCGTTTTGGTACTCAGGCGTCTGACATTGGGTGCCGAGTTGGGAGGGCCGAAGATTTGGGCCCGTCTCACATGTGTGTACTTCATGTCACTTTGGATTATTTTTGTTGTGCTCTCCTCCCTCAAAATTTATGGCATCATATGA 1605 41.87 MAWVHEQLPGNILEAYNISVREKCESYLLFSGETSLGDGFRTFLYFLGLAYCFIGLSAITARFFQSMENVVKHKRKVVKIDPRSNTEIRHEKVWNYTIADITLLAFGTSFPQISLAIIDSIQNLGSRYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDVGVWLVELFWSFWAYVWLYIILEVWTPNVITIWEALLTVLQFGLLLIHAYAQDKQWPYLSLPLPRTERPEDWVPDEAASRKQDKIAGDECSELFQENGNIVDIFSIHSGDGSVYHRISGSEVAEPSNEHFQKNIILEDSHLLSLWKQQFVDAFTLESSESRKLDNIYLWVARIFWQLLLLPWRFLFAFVPPPHIAHGWFAFICSLIFISGIAYIVTKLTDLISCTSGINSYVIAFTALAAGTSWPDLVASKIAAERQTTADSAIANIICSNSVNIYMGIGIPWLINTTYNFIAYREPLGVQNAEGLSFSLLVFFCTSICCIGVLVLRRLTLGAELGGPKIWARLTCVYFMSLWIIFVVLSSLKIYGII* 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3246670 3258448 + Vvi7g312 Vvi7g312 789178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g312 534 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 18 222 - -
Vvi7g312 534 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 310 534 - -
Vvi7g312 534 PANTHER SODIUM/CALCIUM EXCHANGER 18 222 - -
Vvi7g312 534 PANTHER SODIUM/CALCIUM EXCHANGER 310 534 - -
Vvi7g312 534 Pfam Sodium/calcium exchanger protein 45 216 IPR004837 GO:0016021|GO:0055085
Vvi7g312 534 Pfam Sodium/calcium exchanger protein 363 526 IPR004837 GO:0016021|GO:0055085
Vvi7g312 534 Gene3D - 317 528 IPR044880 -
Vvi7g312 534 Gene3D - 96 232 IPR044880 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g312 K03452 - vvi:100250295 1086.25