Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g324 | ATGGATGATAACACAAGTGGAATTTCAAAGGGCCGTGCTCCGTCCAGCTATGCTCTTAGTGGAAAAGTTATGCTGAGTTCAGTTGTTATTCTCTTCACTGTTGTTGCTGTCATTGTTTTTTTCCATTCTTATGCCCGGTGGTTGCTCAGTCGTGACCGGACTAGACGTCACCTCCGCCGCCGTAGCCGTATCCGCTTTGACTCGGACCGCACCACCGCCGTATCCGCCGTCGACGGTGTCGTTGACCAGGGTCTCGACGTCTCCATCCTCAAGTCTCTTCCGACTTTTGTCTACTCAAAGGCCACTCACGGCCCAATTTTAGAATGCGCCGTCTGCTTATCGGAGTTTGAAGATGACGAGAAAGGCCGCGTTTTGCCGAAATGTAACCACTGCTTCCACAATGACTGCATCGACATGTGGTTCCACTCTCACTCCAATTGCCCACTCTGCAGAGCCCTTACGATCTCCGGAGCTTCTCCCCGGTGCCCAAGGGATGATGATGAAAACGAAACGGGTCCATCTTCTTCATTGACTCCGGGGACGTTGACGCTGTTGGAGTGCCCAAGGAAGCCACTGGAGCTGGTGGGTATAACGGTGGAGATGCCGGCCATGAGAGCAGGGGGGTGTAGAGGCTTGGAAGAGGTGGAGTTGGGAACAACGGAGAGCCAATCGTCGAAGTCGCCGGGAAGTCGGATCCTGTCGTTGAAGAGGATTTGGAGCACATAA | 726 | 53.44 | MDDNTSGISKGRAPSSYALSGKVMLSSVVILFTVVAVIVFFHSYARWLLSRDRTRRHLRRRSRIRFDSDRTTAVSAVDGVVDQGLDVSILKSLPTFVYSKATHGPILECAVCLSEFEDDEKGRVLPKCNHCFHNDCIDMWFHSHSNCPLCRALTISGASPRCPRDDDENETGPSSSLTPGTLTLLECPRKPLELVGITVEMPAMRAGGCRGLEEVELGTTESQSSKSPGSRILSLKRIWST* | 242 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3351618 | 3352410 | + | Vvi7g324 | Vvi7g324 | 789190 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g324 | 241 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 76 | 155 | IPR013083 | - | |
Vvi7g324 | 241 | MobiDBLite | consensus disorder prediction | 161 | 180 | - | - | |
Vvi7g324 | 241 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 9 | 203 | - | - | |
Vvi7g324 | 241 | ProSiteProfiles | Zinc finger RING-type profile. | 109 | 151 | IPR001841 | - | |
Vvi7g324 | 241 | Pfam | Ring finger domain | 108 | 151 | IPR001841 | - | |
Vvi7g324 | 241 | SUPERFAMILY | RING/U-box | 89 | 155 | - | - | |
Vvi7g324 | 241 | CDD | RING-H2_EL5_like | 108 | 151 | - | - | |
Vvi7g324 | 241 | PANTHER | RING-H2 FINGER PROTEIN ATL64 | 9 | 203 | - | - | |
Vvi7g324 | 241 | SMART | ring_2 | 109 | 150 | IPR001841 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g324 | - | - | vvi:100855330 | 437.573 |