Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g325 ATGGAAGTTGACTTCACAATACAAACCCCTCAAGTATTCTCTACCAAAATCAAATTAATAAGAATAACCCAACCACCTTATGTCTCTCAAATCTTCTATATAATGGCCTCAACCATCATGCAACATTCCCCATCAACTCATCGACTCTCCCTCTCCCCCTCCCTCTATTCCATGACCATGTCTTCTTCTAAGCTTTCGTTGTCCCTCGTTGCTTTCTCAGCCATTGTCATTTTCCTTGCTCTTTTCTCATCGACATCTCTAGCAGATGACTCCATATGTCAGTCCACACCTGACCCTTCCTCTTGCAAAGGCCTTGTCCAGAGCAACAAATCCGCAAATGTTTACGATTATGGAAGGTCATCTTTGAAGAAGTCGATAGCGACTTCGCGTAAGTTCTTGTCCCTGGTTGACAAGTACCTCAGTGCCCGGTCCAATTTGTCGGCCGCTGCGGTTCGGGCGCTGCAGGACTGTCGCTTTCTAGGAGGACTAAACTTGGATTACTTGTTGAGCTCTTCTCAAGTTGCGGATGCTAATTCTAAAATCCTGTCTGTTCTGGAAGCTGATGATGTGCAAACCTTGCTTAGTGCCCTTTTAACTAACCAGCAAACATGCTTGGATGGTCTGCAAGAGACCTCTTCTTCATGGAGTGTGAAGAACGGTGTTTCAACTCCCCTCCAAAACCGAAAACTCTACGAGTCTTTGAGTAACAGGAAGTTGCTGGACACCGGTAATGATCAGGTTTCGATAAGCGACATCGTGACGGTGAACCAGGATGGGAGTGGAAATTTCGCGACCATTAATGATGCCATAGCTGTAGCTCCAAACAATACCGATGGCAGCAATGGATACTTTGTGATTTACATCCAGGCCGGAGTCTACGAAGAGTACGTATCCATCGCTAAGAATAAGAAGTACTTGATGATGATCGGTGATGGCATCAACCAGACTGTGATCACCGGAAACAGAAGCGTGGTTGATGGATGGACAACTTTCAACTCCGCCACATTTGCTGTGGTGGCACAAGGATTTGTTGCAGTGAACATAACATTCCGGAACACAGCTGGGGCAGCAAAACATCAAGCGGTTGCCCTCCGGAGCGGGGCTGATTTATCAACATTCTACCTGTGCAGCTTTGAAGCCTATCAAGACACCTTATACACCCATTCCCTAAGGCAATTCTACAGAGAATGCGACATATATGGAACGGTTGATTTCATATTTGGCAATGCTGCAGTTGTCTTCCAAAACTGCAACTTATATCCCCGGCTGCCCCTGAGCGGACAGTTCAATGCCATCACCGCCCAAGGCCGGACGGACCCCAATCAGAACACCGGCACCTCAATTCACAACTGTGTCATTCGTGCCGCCGATGATTTGGCTGCAAGCAATGGAACCACAAAGACATACTTGGGAAGGCCATGGAAGGAGTATTCAAGGACAGTGTACATGCAATCAAACATGGGTAGTTTGATTAATCCTTCTGGTTGGAGCATTTGGTCTGGGGATTTTGCTTTAAGTACATTATACTATGCTGAGTACAACAACACCGGACCCGGATCAAACACCAGTAATAGAGTTACATGGTCTGGATACCATGTGATTGGACCTTCTGATGCTGCAAATTTCACTGTCGGCAACTTCCTTCTCGGGGGTGACTGGTTGCCTCAGACTGGGGTGCCTTACACTGGTGGCTTGTTATAA 1701 46.74 MEVDFTIQTPQVFSTKIKLIRITQPPYVSQIFYIMASTIMQHSPSTHRLSLSPSLYSMTMSSSKLSLSLVAFSAIVIFLALFSSTSLADDSICQSTPDPSSCKGLVQSNKSANVYDYGRSSLKKSIATSRKFLSLVDKYLSARSNLSAAAVRALQDCRFLGGLNLDYLLSSSQVADANSKILSVLEADDVQTLLSALLTNQQTCLDGLQETSSSWSVKNGVSTPLQNRKLYESLSNRKLLDTGNDQVSISDIVTVNQDGSGNFATINDAIAVAPNNTDGSNGYFVIYIQAGVYEEYVSIAKNKKYLMMIGDGINQTVITGNRSVVDGWTTFNSATFAVVAQGFVAVNITFRNTAGAAKHQAVALRSGADLSTFYLCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPLSGQFNAITAQGRTDPNQNTGTSIHNCVIRAADDLAASNGTTKTYLGRPWKEYSRTVYMQSNMGSLINPSGWSIWSGDFALSTLYYAEYNNTGPGSNTSNRVTWSGYHVIGPSDAANFTVGNFLLGGDWLPQTGVPYTGGLL* 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3356153 3358272 - Vvi7g325 Vvi7g325 789191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g325 566 CDD PMEI-like_3 91 236 - -
Vvi7g325 566 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 76 237 - -
Vvi7g325 566 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 227 564 - -
Vvi7g325 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 90 221 IPR035513 -
Vvi7g325 566 SUPERFAMILY Pectin lyase-like 250 564 IPR011050 -
Vvi7g325 566 Pfam Plant invertase/pectin methylesterase inhibitor 91 229 IPR006501 GO:0004857
Vvi7g325 566 Gene3D - 246 565 IPR012334 -
Vvi7g325 566 SMART PMEI_2 83 240 IPR006501 GO:0004857
Vvi7g325 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 90 238 IPR035513 -
Vvi7g325 566 Pfam Pectinesterase 253 550 IPR000070 GO:0030599|GO:0042545
Vvi7g325 566 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Vvi7g325 566 PANTHER PECTINESTERASE 227 564 - -
Vvi7g325 566 PANTHER PECTINESTERASE 76 237 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g325 K01051 - vvi:100258932 978.393