Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g390 | ATGAAGGATCTCGACTTCGCCGGTGACAAGGCCTTCGCGAAGGATTTTCTCTCGAATTTCGCCGATGCGTTTGGCGAAGCCAAATACATAAAAATCTTTCAAGAAGTCGCCAACCGCAAAAGTCGCGCCATCCAGATCGAGCTTGAGGACCTATTTAATTACAAAGACGTGGACGAAGACTTTCTTAGGCGGGTCACTGAAAATACTCGGCGATATATTGGAATATTTGCTGACGCTATTGATGAGCTCATGCCGGAGCCCACAGAGGCCTTCCTAGACGATGATCATGATATTCTGATGACACAAAGGTCTGAGGAGGGAACGGAAAATGTAGATGGTGCTGATCCACGGCAGAAGATGCCTCCGGAGATTAAACGTTTCTATGAAGTTTATATCAGAGCATCTTCAAAGGAACGGCCATTTACAATCAGGGAGGTGAAAGCATCATATATTGGCCAGCTTGTCAGGATATCTGGCATTGTTACGCGGTGTTCGGATGTCAAGCCATTGATGCAGGTGGCAGTGTATACATGTGAAGATTGTGGGTTCGAAATTTACCAGGAAGTAACTGCTCGAGTCTTCATGCCCCTGTTTGAGTGTCCATCCACACGCTGCCAGACAAATAGGACAAAGGGGAACATCATCCTTCAACTCAGAGCCTCAAAGTTTTTGAAGTTTCAGGAGGCCAAGATTCAAGAGTTAGCTGAACATGTTCCAAAAGGCCATATTCCAAGGACAATGACTGTTCATCTCAGGGGAGAACTCACGAGAAAGGTTGCTCCTGGTGATGTTGTTGAATTATCAGGGATTTTTCTTCCCATTCCTTATACTGGATTCAGAGCAATGCGTGCTGGCTTAGTTGCAGATACATACTTAGAGGCCATGTCTGTAACCCATTTCAAGAAAAAATATGAGGAGTATGAACTTAGACGAGATGAGGAAGAACAAATTGCACGCTTAGCTGAGGATGGTGATATATATAATAAGTTGGCTCGATCATTAGCACCTGAAATTTTTGGACATGAAGATGTCAAGAAGGCTCTACTTCTTCTCCTTGTAGGCGCTCCTCACAGGAAGTTGAAAGATGGAATGAAGATAAGAGGAGATTTACATATTTGTTTGATGGGTGATCCTGGGGTTGCTAAAAGTCAACTTCTTAAGCATATAATCAATGTTGCACCTAGGGGAGTGTATACCACTGGCAGAGGAAGCAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAAGGATCCTGTAACAAATGAAATGGTCCTGGAAGGGGGAGCACTGGTTCTTGCCGATATGGGCATATGTGCAATTGATGAGTTTGACAAGATGGAAGATTCAGATCGCACAGCAATTCATGAAGTAATGGAGCAGCAGACTGTTAGCATTGCCAAGGCTGGAATCACTACATCTCTGAATGCAAGAACTGCTGTTCTTGCTGCTGCCAATCCAGCCTGGGGAAGATATGACCTAAGGAGAACTCCTGCCGAAAATATTAATCTCCCTCCAGCTCTTCTATCAAGATTTGATCTTTTGTGGTTGATCCTCGATCGAGCAGATATGGACAGCGATCTTGAAATGGCTAGGCATGTTGTTTATGTCCACAAGAATAAAGAATCACCTGCTCTTGGGTTTACTCCACTTGAGCCATCTATTCTTCGGGCTTATATTTCAGCTGCCAGAAGAATTTCTCCCTGTGTTCCAAAGGAGCTAGAGGAGTATATTGCTAGTGCGTACTCTGGCATTCGGCAAGAAGAAGCCAAATCAAGTAGTCCCCATTCCTATACAACTGTGAGAACTCTGCTTAGCATTCTCCGGATATCAGCTGCACTAGCAAGACTTCGATTTTCAGAAACTGTGGCACAGAGTGATGTGGATGAAGCACTTAGGTTAATGCAAATGTCAAAATTCTCTTTGTACTCTGATGATCGCCAGAAATCTGGTCTTGATGCTATCTCTGATATCTATTCAATCTTGCGCGATGAAGCTGCAAGGAGTAACAGGATGGACTTGAGCTATGCCCATGCACTGAATTGGATTTCTAGAAAGGGTTACAGTGAAGCCCAGTTGAAAGAATGCTTGGAGGAATATGCAGCCTTGAATGTGTGGCAGATCCATCCCAACACCTTTGACATCCGATTCATTGATGCCTGA | 2157 | 44.32 | MKDLDFAGDKAFAKDFLSNFADAFGEAKYIKIFQEVANRKSRAIQIELEDLFNYKDVDEDFLRRVTENTRRYIGIFADAIDELMPEPTEAFLDDDHDILMTQRSEEGTENVDGADPRQKMPPEIKRFYEVYIRASSKERPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVAVYTCEDCGFEIYQEVTARVFMPLFECPSTRCQTNRTKGNIILQLRASKFLKFQEAKIQELAEHVPKGHIPRTMTVHLRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEAMSVTHFKKKYEEYELRRDEEEQIARLAEDGDIYNKLARSLAPEIFGHEDVKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMEDSDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLEMARHVVYVHKNKESPALGFTPLEPSILRAYISAARRISPCVPKELEEYIASAYSGIRQEEAKSSSPHSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAISDIYSILRDEAARSNRMDLSYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPNTFDIRFIDA* | 719 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3956396 | 3963973 | - | Vvi7g390 | Vvi7g390 | 789256 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g390 | 718 | Pfam | MCM AAA-lid domain | 553 | 636 | IPR041562 | - | |
Vvi7g390 | 718 | ProSitePatterns | MCM family signature. | 435 | 443 | IPR018525 | GO:0003677|GO:0005524|GO:0006260 | |
Vvi7g390 | 718 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM7 | 36 | 696 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Vvi7g390 | 718 | Gene3D | - | 311 | 643 | IPR027417 | - | |
Vvi7g390 | 718 | PRINTS | Mini-chromosome maintenance (MCM) protein 7 signature | 120 | 132 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Vvi7g390 | 718 | PRINTS | Mini-chromosome maintenance (MCM) protein 7 signature | 158 | 169 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Vvi7g390 | 718 | PRINTS | Mini-chromosome maintenance (MCM) protein 7 signature | 176 | 187 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Vvi7g390 | 718 | PRINTS | Mini-chromosome maintenance (MCM) protein 7 signature | 193 | 205 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Vvi7g390 | 718 | PRINTS | Mini-chromosome maintenance (MCM) protein 7 signature | 285 | 295 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 | |
Vvi7g390 | 718 | ProSiteProfiles | MCM family domain profile. | 326 | 532 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Vvi7g390 | 718 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 367 | 382 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Vvi7g390 | 718 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 427 | 441 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Vvi7g390 | 718 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 455 | 468 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Vvi7g390 | 718 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 479 | 491 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Vvi7g390 | 718 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 506 | 514 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Vvi7g390 | 718 | Pfam | MCM OB domain | 143 | 273 | IPR033762 | - | |
Vvi7g390 | 718 | Gene3D | - | 143 | 271 | IPR012340 | - | |
Vvi7g390 | 718 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 36 | 696 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Vvi7g390 | 718 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 336 | 647 | IPR027417 | - | |
Vvi7g390 | 718 | Pfam | MCM P-loop domain | 314 | 536 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Vvi7g390 | 718 | SUPERFAMILY | Nucleic acid-binding proteins | 14 | 294 | IPR012340 | - | |
Vvi7g390 | 718 | SMART | mcm | 139 | 638 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Vvi7g390 | 718 | Coils | Coil | 297 | 317 | - | - | |
Vvi7g390 | 718 | Pfam | MCM N-terminal domain | 14 | 132 | IPR027925 | - | |
Vvi7g390 | 718 | Gene3D | - | 10 | 100 | - | - | |
Vvi7g390 | 718 | Gene3D | - | 170 | 224 | - | - | |
Vvi7g390 | 718 | SMART | AAA_5 | 368 | 521 | IPR003593 | - | |
Vvi7g390 | 718 | Coils | Coil | 713 | 718 | - | - | |
Vvi7g390 | 718 | CDD | MCM7 | 329 | 636 | IPR008050 | GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g390 | K02210 | - | vvi:100267599 | 1390.17 |