Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g404 ATGGCCCATGCTGATTTACCTGATAATCAACTGGAAGCACCATTGGTGTCTCCAACTAGTGCGCCATTAGCTACACCTGCTCTTCCAGATCTGCCCTTGCCATCTAATTTGCCGCTATACCATAGACGAAAGCAGAAACATCCAATGCCAAGCCATGTGCCAAAACGAGTGCTAGCACCATCCCAACCTCCTGATTATGGTCCACTTGTGACTTCTGCTCACCCTCCTACAAGTTCACGCTTGTCAAAACCGTCAATGAAGAGGGGTGGATTGGTATCTCCTGGTACTGGCCTTGTACCTCCTCATTTGGAAGATATTGCTCCTATGCAGTCCAATGCTGGCCCCATTCCTGTGGGTTTAGCTCAGCCACCACTGTCTCCTTCAGACTCCAATTGTTGTGAACCAGACATGGTGCTGAAACAGGGGAGCCATGGTTGCCATTGTGTGTATCCTATAAAGGTCGACCTTGTCCTTTTGAATGTCTCACAGAACCCAAATTGGAAACTTTTTCTAGAAGAACTAGCCACCCAGCTTGGTTTACGAGTTTCTCAAATTGAGCTGATAAATTTCTATCTGCTCAGCTTATCAAGGCTAAATATTTCAATGGATATTATTCCACATACAGGGATCAGTTTCTCTGCAAGCGATGCATCTAAAATAAACTCTTCACTTGCTGCACATATGGTTCATCTAGACCCTACATCAGTAGGTGTGGGTGATTACAAACTTCTTAATGTAACCTGGTTTAAGCCCCCAGTGCCCTCTCCAGCTCCTCTTGTTGCTACCTCACCCATGGAAGCACCTGCTAATCAGTACTCAGCTTCTACCTCACATGTCGATTCAAACAAAAGGAAACACCCAAATTTGGTTCTTATTCTTGGTATCATTGCTGGCATCTTAACTGTTGCCATTATATGTGTGATTATGGTTTCTTTATGTGCATCCTGTCGTAAGAAGACAAAACCATCTCCAGAAGAAAATGTAAAGCCAAGTACTGCAGATCCAGTTCCAGTTGTAGGATCTCTTCCTCATCCAACAAGTACACGGTTTCTTGCATATGAAGAACTTAAGGAGGCAACGAACAATTTTGAGCCTGCTAGCATACTTGGTGAGGGTGGGTTTGGCAGAGTTTTCAAGGGTGTCTTAAGTGATGGTACAGCTGTGGCAATTAAGAGGCTTACTAGTGGAGGGCAACAAGGGGATAAAGAGTTTTTGGTTGAGGTCGAGATGCTTAGCAGGTTGCATCACCGTAATCTTGTGAAACTTGTGGGTTACTATAGCAATCGTGACTCTTCACAAAATCTCCTTTGTTATGAGCTTGTCCCAAATGGAAGCTTAGAGGCCTGGCTCCATGGCCCTCTGGGAGTCAACTGTCCTTTGGATTGGGACACCCGAATGAAGATTGCTCTTGATGCTGCCAGAGGGCTTGCATACCTGCATGAGGATTCACAACCCTGTGTTATCCACAGAGATTTCAAGGCGTCAAATATATTGCTCGAGAACAACTTTCATGCCAAGGTTGCTGATTTTGGCCTAGCCAAAAAGGCACCTGAAGGCAGGGCAAATTACCTGTCTACTCGTGTGATGGGCACATTTGGGTATGTAGCCCCTGAGTATGCTATGACTGGACATCTACTAGTAAAAAGTGATGTTTACAGCTATGGAGTTGTCCTCCTTGAGTTGTTGACAGGGAGAAGGCCTGTGGAGATGTCACAACCATCTGGACAGGAGAACCTTGTTACTTGGGCCAGACCAATTCTTAGAGACAAGGATCGGCTTGAAGAGCTAGCTGATGAAAGGCTTGCTGGAAAGTATCCAAAGGAAGATTTTGTACGAGTTTGCACAATTGCAGCAGCTTGTGTTGCACCTGAAGCAAACCAACGGCCCACAATGGGAGAAGTGGTGCAGTCACTGAAAATGGTACAGCGTGTAATGGAATATCAGGATTCCATGCTAACTTCCTCCAATGCGAGGCCGAACCTGAGGCAGTCATCTACCACCTTTGAATCAGATGGGACATCATCAATTTTCTCTTCTGGCCCTTACTCTGGTCTTAGTGCATTTGATAATGACAATATCTCTCGGACGGCAGTTTTCTCTGAAGATCTTCATGAAGGACGATAA 2124 45.34 MAHADLPDNQLEAPLVSPTSAPLATPALPDLPLPSNLPLYHRRKQKHPMPSHVPKRVLAPSQPPDYGPLVTSAHPPTSSRLSKPSMKRGGLVSPGTGLVPPHLEDIAPMQSNAGPIPVGLAQPPLSPSDSNCCEPDMVLKQGSHGCHCVYPIKVDLVLLNVSQNPNWKLFLEELATQLGLRVSQIELINFYLLSLSRLNISMDIIPHTGISFSASDASKINSSLAAHMVHLDPTSVGVGDYKLLNVTWFKPPVPSPAPLVATSPMEAPANQYSASTSHVDSNKRKHPNLVLILGIIAGILTVAIICVIMVSLCASCRKKTKPSPEENVKPSTADPVPVVGSLPHPTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKKAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVEMSQPSGQENLVTWARPILRDKDRLEELADERLAGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVMEYQDSMLTSSNARPNLRQSSTTFESDGTSSIFSSGPYSGLSAFDNDNISRTAVFSEDLHEGR* 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4072813 4078927 - Vvi7g404 Vvi7g404 789270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g404 707 MobiDBLite consensus disorder prediction 320 339 - -
Vvi7g404 707 MobiDBLite consensus disorder prediction 1 95 - -
Vvi7g404 707 CDD STKc_IRAK 369 639 - -
Vvi7g404 707 Gene3D Transferase(Phosphotransferase) domain 1 441 660 - -
Vvi7g404 707 Gene3D Phosphorylase Kinase; domain 1 345 440 - -
Vvi7g404 707 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Vvi7g404 707 ProSiteProfiles Protein kinase domain profile. 363 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g404 707 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 2 707 - -
Vvi7g404 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Vvi7g404 707 Pfam Protein tyrosine and serine/threonine kinase 367 638 IPR001245 GO:0004672|GO:0006468
Vvi7g404 707 MobiDBLite consensus disorder prediction 652 674 - -
Vvi7g404 707 PANTHER OS01G0750732 PROTEIN 2 707 - -
Vvi7g404 707 SUPERFAMILY Protein kinase-like (PK-like) 337 640 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g349 Vvi7g404 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76751 PF07714 PK_Tyr_Ser-Thr 8.40E-45 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g404 - - vvi:100264089 1381.7