Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g413 ATGGAGAGGAGCGGGGTGATGAAAATGGAGGATCCAGTTGGTTCGTGGTCATTTTCAGATCACGCTCCGGATATTCCGGCCGTGTTTGACTTCTCCGACGAAGGCGAGAAGGGAACGCTAGGGTTCATGGAGTTACTGAGTATTCAAAATTATGGGCCGCCGTTGTTTGATTTGGTGCAGCTGCCGTCTTTGGAGAAACCGACGGGTGCAGCTCCGGCAGTGCCGGCGTCTTCTGACGTGGTGAATCCACCGGCCACGCCGAACTCGTCGTCGGTGTCGTCGGCGTCCAGTCATGAGCAAGGCAGCAAAGCAGTTGAAGAAGAGGAGGAGGATGAGGAAGAGAAGAAGACTAAGAAAGAGTTGAAGCCCAAGAAGACAACAAGTCAAAAGAGGCAGAGAGAACCGAGATTCGCCTTCATGACAAAGAGCGAGGTTGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGCCAAAAAGCTGTGAAAAACAGCCCCTTTCCTAGGAGTTACTATCGTTGCACCAGTGCATCATGTAATGTGAAGAAACGAGTGGAGAGGTGTTTCAAGGATCCGGCCATTGTCGTAACCACCTACGAAGGTCAACACACCCACCCAAGCCCAATCATGCCTCGAGCAAACCCATCCTCCATTGCCACCACCTTTGCTGGCCCGAGGCTTCAAACGACGCCGTTTCAACACCTACACCTCCACCACCACCAGCAACAGCAACATCCCTCTTTCAACGATGTTCCACTCTTGAATTATGGCCATGGCAGCAGCTTTGGGAGCGCCGCAAGGTCTGTTCAAGAGAGGCGTTCTTGCGCACCAACTTCTGCTTTGCATAGAGACCATGGCCTTCTTCAAGATATTGTGCCCTCCCATATGAGAAAGGAAGAGGAGATATGA 909 51.82 MERSGVMKMEDPVGSWSFSDHAPDIPAVFDFSDEGEKGTLGFMELLSIQNYGPPLFDLVQLPSLEKPTGAAPAVPASSDVVNPPATPNSSSVSSASSHEQGSKAVEEEEEDEEEKKTKKELKPKKTTSQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERCFKDPAIVVTTYEGQHTHPSPIMPRANPSSIATTFAGPRLQTTPFQHLHLHHHQQQQHPSFNDVPLLNYGHGSSFGSAARSVQERRSCAPTSALHRDHGLLQDIVPSHMRKEEEI* 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4200159 4202241 + Vvi7g413 Vvi7g413 789279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g413 302 MobiDBLite consensus disorder prediction 67 138 - -
Vvi7g413 302 MobiDBLite consensus disorder prediction 112 138 - -
Vvi7g413 302 ProSiteProfiles WRKY domain profile. 143 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g413 302 Coils Coil 102 122 - -
Vvi7g413 302 PIRSF WRKY_txn_fact_IIc 1 301 IPR017396 GO:0003700
Vvi7g413 302 MobiDBLite consensus disorder prediction 81 100 - -
Vvi7g413 302 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 292 IPR044810 GO:0003700
Vvi7g413 302 PANTHER WRKY TRANSCRIPTION FACTOR 17 292 - -
Vvi7g413 302 Gene3D WRKY domain 133 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi7g413 302 Pfam WRKY DNA -binding domain 149 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g413 302 SMART WRKY_cls 148 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g413 302 SUPERFAMILY WRKY DNA-binding domain 140 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g48 Vvi7g413 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15033 PF03106 WRKY 3.60E-26 CL0274 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g413 - - vvi:100264006 544.658