Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi7g437 | ATGGCCTATTACGTTATCAATTATTCAAAGCTCCGTATCTGGGAGTTCGTGGAGTACAGTAAGATGATATACTTGGATGGGGATATTCAAGTCTACGATAACATTGACCACCTCTTTGAGCTACCAGACGGACATTTCTATGCAGTGATGGACTGTTTCTGTGAGAAAACATGGAGTCACACGCCACAGTACAAGATTGGATACTGCCAACAGTGTCCGGAAAAGGTTCAGTGGCCAGCGGAGCTGGGTCAGCCGCCTTCACTTTACTTCAACGCAGGCATGTTCGTGTTTGAGCCCAGCCTCTCCACCTATGAAGATCTCTTGGAAACCCTCAGGATCACCCCTGCAACCCCTTTTGCAGAGCAGGATTTCTTGAATATGTACTTCAGCGATGTATATAAGCCTATTCCTCTGGTCTACAATCTTGTCCTTGCCATGCTGTGGCGGCATCCTGAGAATGTAGAGCTTGATAAAGTGAAAGTTGTTCACTACTGTGCAGCGGGGTCGAAGCCATGGAGGTACACAGGGAAGGAGGACAACATGCAGAGAGAGGACATTAAGATGCTGGTAAACAAATGGTGGGAGATATACAATGACAAGTCATTGGATTACAAGAAGACGAGGATGATGGCGAATGATTACAGCAGTGTTTTGCCGGGGGAGCAGGTGAATTTGGAGCCGTTCATTGCAGCTCTTTCCGAGGTGGGGCATGTTGAATTTGTGAGAGCCCCTTCAGCAGCCTAG | 744 | 47.58 | MAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYDNIDHLFELPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPEKVQWPAELGQPPSLYFNAGMFVFEPSLSTYEDLLETLRITPATPFAEQDFLNMYFSDVYKPIPLVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEDNMQREDIKMLVNKWWEIYNDKSLDYKKTRMMANDYSSVLPGEQVNLEPFIAALSEVGHVEFVRAPSAA* | 248 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4416338 | 4418032 | + | Vvi7g437 | Vvi7g437 | 789303 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi7g437 | 247 | PANTHER | GLYCOGENIN SUBFAMILY MEMBER | 1 | 247 | - | - | |
| Vvi7g437 | 247 | Pfam | Glycosyl transferase family 8 | 3 | 175 | IPR002495 | GO:0016757 | |
| Vvi7g437 | 247 | PANTHER | HEXOSYLTRANSFERASE | 1 | 247 | IPR030515 | GO:0006012|GO:0047216 | |
| Vvi7g437 | 247 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 3 | 205 | IPR029044 | - | |
| Vvi7g437 | 247 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1 | 206 | IPR029044 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Vvi7g437 | Vvi14g68 | ECH | |
| Vvi7g437 | Vvi14g69 | ECH | |
| Vvi7g437 | Vvi14g71 | ECH | |
| Vvi5g24 | Vvi7g437 | ECH |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi7g437 | K18819 | - | vvi:100255485 | 525.783 |