Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g438 ATGGCCTATTACGTTATCAATTATTCAAAGATCCGTATCTGGGAGTTCGTGGAGTACAGTAAGATGATATACTTGGATGGGGATATTCAAGTCTACGATAACATTGACCACCTCTTTGAGCTACCAGACGGACATTTCTATGCAGTGATGGACTGTTTCTGTGAGAAAACATGGAGTCACACGCCACAGTACAAGATTGGAGACTGCCAACAGTGTCCGGAAAAGGTTCAGTGGCCGGCGGAGCTGGGTCAGCCGCCTTCACTTTACTTCAACGCAGGCATGTTTGTGTTTGAGCCCAGCCTCTCCACCTATGAAGATCTCTGGGAAACCCTCAGGATCACCCCTGCAACCCCTTTTGCAGAGCAGGATTTCTTGAATATGTACTTCAGGGATGTATATAAGCCTATTCCTCTGGTCTACAATCTTGTCCTTGCCATGCTGTGGCGGCATCCTGAGAATGTAGAGCTTGATAAAGTGAAAGTTGTTCACTACTGTGCAGCGGGGTCGAAGCCATGGAGGTACACAGGGAAGGAGGACAACATGCAGAGAGAGGACATTAAGATGCTGGTAAACAAATGGTGGGAGATATACAATGACAAGTCATTGGATTACAAGAAGACGAGGATGATGGCGAATGATTACAGCAGCGTTTTGCCGGGGGAGCAGGTGAATTTGGAGCCTTTCATTGCAGCTCTTTCCGAGGTGGGGCATGTTGAATTTGTGAGAGCCCCTTCAGCAGCCTAG 744 47.72 MAYYVINYSKIRIWEFVEYSKMIYLDGDIQVYDNIDHLFELPDGHFYAVMDCFCEKTWSHTPQYKIGDCQQCPEKVQWPAELGQPPSLYFNAGMFVFEPSLSTYEDLWETLRITPATPFAEQDFLNMYFRDVYKPIPLVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEDNMQREDIKMLVNKWWEIYNDKSLDYKKTRMMANDYSSVLPGEQVNLEPFIAALSEVGHVEFVRAPSAA* 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4422472 4424163 + Vvi7g438 Vvi7g438 789304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g438 247 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 206 IPR029044 -
Vvi7g438 247 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 247 - -
Vvi7g438 247 Pfam Glycosyl transferase family 8 3 175 IPR002495 GO:0016757
Vvi7g438 247 SUPERFAMILY Nucleotide-diphospho-sugar transferases 3 205 IPR029044 -
Vvi7g438 247 PANTHER GALACTINOL SYNTHASE 1 1 247 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g438 Vvi14g65 ECH
Vvi7g438 Vvi14g68 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g438 K18819 - vvi:100250305 528.48