Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g446 ATGGAGGAGACTTTTGTACCATTTCGTGGAATAAAGAATGATCTTCGAGGAAGATTGATGTGCTACAAGCAAGATTGGGCTGGTGGATTCAGAGCAGGCTTCCGGATTTTGGCCCCTACCACGTACATATTCTTTGCTTCTGCTATCCCGGTCATTTCATTTGGTGAACAACTGGAGAGAAATACTGAAGGAGTTCTGACTGCAGTTCAGACCTTGGCATCCACAGCAATTTGTGGGATTATACACTCCATCATTGGAGGACAACCCCTGCTGATCTTAGGAGTTGCAGAGCCCACTGTCATCATGTACACATTCATGTTCAATTTTGCCAAGGAGAGACCAGATTTGGGCCGGAAGCTGTTTCTAGCATGGACTGGATGGGTATGTGTGTGGACTGCATTCTTGCTGTTCTTACTGGCTATCTTAGGAGCTTGCTCCATTATCAATAGGTTTACCCGTGTGGCAGGAGAATTGTTTGGTCTGCTCATCGCTATGCTCTTCATGCAGCAAGCTATTAAGGGAATTGTGGATGAGTTTCGCATACCAAAACAAGAAAATGCCAAGTTAACAGAGTTCATACCTTCATGGAGATTCGCAAATGGGATGTTTGCTTTGGTTCTCTCATTTGGCCTTCTGCTCACAGCATTAAGAAGCCGAAAAGCAAGGTCATGGAGATATGGGACTGGTTGGCTTCGGAGCCTTATAGCAGACTATGGTGTGCCCCTTATGGTTCTAATCTGGACAGCGGTTTCCTACATACCTGCTGGAAGCGTTCCAAAAGGAATTCCACGACGCCTTGTCAGCCCAAATCCATGGTCACCTGGTGCATACGAGAATTGGACTGTCATTAAGGACATGCTTGATGTGCCAGTTCTCTATATAGTCGGAGCTTTTATTCCAGCGACGATGATCGCAGTGCTTTACTATTTTGACCATAGTGTAGCATCTCAACTTGCTCAGCAGAAAGAATTCAATTTGAGAAAGCCACCATCTTTCCATTATGACTTGCTTCTTTTAGGGTTCTTGACCATTATGTGTGGTCTTATTGGAATCCCTCCATCAAATGGTGTGATCCCACAATCTCCAATGCATACAAAAAGTCTGGCTACTCTTAAACATCAGTTGCTTCGTAACCGTCTTGTTGCAACAGCACGCATAAGTATGAGAAAGAACTCAAGCTTAAGTCAATTGTATGGAAATATGCAAGAAGCTTATCAGCAAATGCAGACCCCTTTGATCTACCAGGAGCCCTCAGCTCGAGGACTAAAGGAGTTAAAAGAATCAACAATTCAATTGGCTTCAAGCATGGGGGCAATTGATGCCCCAGTTGATGAGACGGTATTTGATGTTGAGAAGGAGATTGATGACCTACTGCCTGTGGAGGTGAAAGAACAGCGCCTGAGCAACTTGCTTCAAGCCGCAGCAGTTGGTGGATGTGTTGCAGCCATGCCTATCCTTAAAATGATCCCAACCTCAGTACTTTGGGGCTACTTTGCCTTCATGGCCATTGAAAGTTTACCAGGTAACCAGTTTTGGGAAAGGATTTTATTGCTCTTCACCGCACCAAGCAGAAGATACAAAGTTCTAGAGGAGTATCATGCCACCTTCGTGGAAACTGTGCCTTTCAAGAGTATTGCGACATTTACAATTTTCCAAACAGCATACTTGCTTATCTGTTTTGGGATCACATGGGTTCCAATTGCAGGGTTGTTGTTCCCTTTGATGATCATGCTTTTGGTTCCTGTGAGACAATACTTTCTGCCCAAGTTTTTCAAAGGGGCACACCTTCAAGATTTAGATGCAGCAGAGTATGAAGAGGCACCAGCTTTACCTTTCAATCTTGCAATGGAGGGAGAGATGGGGGCTGGAGCTTCTTTGGCAGAGGGTGGAGAGATTTTAGATGAAATAATTACTAGAAGCCGTGGTGAAATTAGGCATATGTGCAGTCCTAAGATCACAAGCTCCACTGCAACACCAACAAAAGATCCCAGAAACTTTCAGAGTCCTCGTCTATCAGAAAAAGCATACAGCCCTCGAGTAAGCGAACTAAGAGGGGAGCATAGTCCTCAATCAAGCGGGAGAGGGAAATACAGTCCAAAGACAGGAGAAGTGAAGCCGTCTAACTTGGGAAAAAGTCCACATTCCTCAAACTAA 2154 44.66 MEETFVPFRGIKNDLRGRLMCYKQDWAGGFRAGFRILAPTTYIFFASAIPVISFGEQLERNTEGVLTAVQTLASTAICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPDLGRKLFLAWTGWVCVWTAFLLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGIVDEFRIPKQENAKLTEFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGTGWLRSLIADYGVPLMVLIWTAVSYIPAGSVPKGIPRRLVSPNPWSPGAYENWTVIKDMLDVPVLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFLTIMCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATARISMRKNSSLSQLYGNMQEAYQQMQTPLIYQEPSARGLKELKESTIQLASSMGAIDAPVDETVFDVEKEIDDLLPVEVKEQRLSNLLQAAAVGGCVAAMPILKMIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEEYHATFVETVPFKSIATFTIFQTAYLLICFGITWVPIAGLLFPLMIMLLVPVRQYFLPKFFKGAHLQDLDAAEYEEAPALPFNLAMEGEMGAGASLAEGGEILDEIITRSRGEIRHMCSPKITSSTATPTKDPRNFQSPRLSEKAYSPRVSELRGEHSPQSSGRGKYSPKTGEVKPSNLGKSPHSSN* 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4481601 4485836 + Vvi7g446 Vvi7g446 789312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g446 717 Gene3D Helical hairpin bin 18 60 - -
Vvi7g446 717 PANTHER ANION EXCHANGE PROTEIN 1 705 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vvi7g446 717 MobiDBLite consensus disorder prediction 649 674 - -
Vvi7g446 717 PANTHER BORON TRANSPORTER 2-RELATED 1 705 - -
Vvi7g446 717 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016021
Vvi7g446 717 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Vvi7g446 717 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Vvi7g446 717 MobiDBLite consensus disorder prediction 648 717 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g225 Vvi7g446 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g446 K24194 - vvi:100247044 1418.68