Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g449 ATGGTAGCGGAGGCTGAGGTTGTATGTCAACAGAGGGTTCCAGTGCTGGACGTTCAATATTATGCAAGAGAAAACAATATCGAGGACGTGGTGGCAATTTCGACGTCTCTTTCCTCTCCGAGTTTTGATCCGATTTGCGCTTCGGATTCGGTTTCGGCTGATTCATCCGGCACTCAAGTGGATATAAAATCTCCTGAGAAAAATCCAGACGCTACTCTTGAATCTGCTATTGTGCAATTTGTCCCTTGCATCCGATCTGGTAGCTTTGCTGACATTGGACCAAGGAGGTACATGGAAGATGAGCATATAAGGATAGATGATCTATCTATGCACTTGGGTTCAGTCTCTAGGCTCCCGAACCCATGTGCTTTTTATGGGGTATTTGATGGCCATGGAGGACCTGAAGCTGCAGCTTATGTCAGAAAAAATGTGGACAGATTTTTCTTTGAAGATGCTAACTTTCCTCGCACATCTGAAGTTAATGATGTTTTCTCGGAGAGGGTTGAAAATTCTGTCCGGAAGGCATTTCTTCTGGCTGATCTAGCTTTGGCAGATGATAGTGGTGTGAGCAGTTCTTCTGGGACAACAGCACTTACTGCTCTGATATTTGGGAGAACTCTAATGGTTGCCAATGCTGGTGACTGCCGGGCAGTTCTTTGCCGAAAAGGTCAGGCAGTAGACATGTCTCAAGACCATAGACCTAGTTACCCATTAGAACGGAAGCGTGTTGAAGAATTGGGAGGTTTTGTTGATGGTGAGTATCTCAATGGGGTTTTATCAGTAACCCGAGCACTGGGGGACTGGGATATGAAGTTCCCCCGGGGCTCTGCATCACCGCTCATTGCAGAGCCAGAATTCAGGCAGGTGGCATTAACAGAGGAGGACGAATTCCTCATCATTGGGTGTGATGGTATTTGGGATGTGATGTCTAGTCAGGAGGCAGTTAGCCTTGTGCGTCGTGGCCTACGGCGGCATGATGACCCAGAGCAGTCTGCAAGGGACCTTGTCATGGAGGCTCTGCGCCTCAACACATTTGACAATCTCACTGTTATTGTCATTTGTTTTTCTTCTCCTGATCAGTTTGAACCAACACCTCCACGACAACGCAGATTCAGGTGCTGCAACATCTCCATGGAGGCCCTTTGCAGTTTGAGGAGCTTATTGGACAACAATGGCAACCGATGA 1185 47.43 MVAEAEVVCQQRVPVLDVQYYARENNIEDVVAISTSLSSPSFDPICASDSVSADSSGTQVDIKSPEKNPDATLESAIVQFVPCIRSGSFADIGPRRYMEDEHIRIDDLSMHLGSVSRLPNPCAFYGVFDGHGGPEAAAYVRKNVDRFFFEDANFPRTSEVNDVFSERVENSVRKAFLLADLALADDSGVSSSSGTTALTALIFGRTLMVANAGDCRAVLCRKGQAVDMSQDHRPSYPLERKRVEELGGFVDGEYLNGVLSVTRALGDWDMKFPRGSASPLIAEPEFRQVALTEEDEFLIIGCDGIWDVMSSQEAVSLVRRGLRRHDDPEQSARDLVMEALRLNTFDNLTVIVICFSSPDQFEPTPPRQRRFRCCNISMEALCSLRSLLDNNGNR* 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4522997 4525468 + Vvi7g449 Vvi7g449 789315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g449 394 Gene3D - 67 361 IPR036457 -
Vvi7g449 394 SMART PP2C_4 75 353 IPR001932 -
Vvi7g449 394 SMART PP2C_SIG_2 100 355 IPR001932 -
Vvi7g449 394 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Vvi7g449 394 CDD PP2Cc 84 355 IPR001932 -
Vvi7g449 394 SUPERFAMILY PP2C-like 78 357 IPR036457 -
Vvi7g449 394 PANTHER PROTEIN PHOSPHATASE 2C 1 374 IPR015655 GO:0004722|GO:0006470
Vvi7g449 394 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Vvi7g449 394 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 374 - -
Vvi7g449 394 Pfam Protein phosphatase 2C 95 347 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g219 Vvi7g449 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g449 K14803 - vvi:100246961 758.444