Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g457 | ATGGACGATAGCTGTGCCGTTTGCGCCGAGACTCTCGAATGGGTTTCGTACGGACCATGTGGCCATCGCGATGTGTGCTCGACTTGCGTGGCTCGTCTTCGCTTCATCTGCGACGATCGCCGTTGCTGCATCTGCAAAACCGAGTGCAACGTTGTCTTTGTCACGAAGGCCTTAGGAGATTATACAAGAATGGTTAATGATTTTTCAATCCTGCCAACCGAATCAAGGGAGGGTCAAGTGGGAATGTATTGGTATCATGAGGACACACAAGCATTTTTTGATGATGTGGACCACTACAAGATGATCAAGGCAATGTGCAGGCTTTCTTGCAGCGTATGTGACCAGATGGAGGAGCAATCAAATGATGGCTCAAAGAGAAGGCAAAAGTTTAGGAATATTGACCAGTTGAAGGGTCATTTATTCCATCGGCATAAATTGTTCATGTGCAGTTTGTGTTTGGAAGGAAGAAAAGTATTTATTTGTGAACAAAAGCTCTACAATAGAGCACAGTTGAATCAGCATATAAACACAGGTGACTCTGAGGTGGATGGAAATGAGGCTGAAAGAGGTGGCTTCATGGGGCATCCGATGTGTGACTTCTGTAGAAGCCCATTTTATGGAGATAATGAGCTGTACTCGCATATGTCCACGGAACATTATACCTGTCATATATGCCAAAGGCAGAACCCTGGACAATTTGAATACTATAAAAATTATGATGACCTAGAGATCCATTTCCGGAGAGACCATTTCTTATGTGAGGACGAAGCCTGCCTTGCAAAAAAGTTTGTCGTCTTTCAATCTGAAGCAGAAATGAAGAGGCATAATGCTATAGAACATGGAGGACGTATGTCTCGCTCTAAACGTAATGCTGCTCTTCAGATACCAACAAGTTTTCGCTATCGAAGAAGTACTGAACAAGATCAACGCCGTGGAAGAGGAAGGACATTTAATCGTGATTCCTCTGCTGATCAACTCTCCTTGGCCATTCAAGCTAGTTTGGAGACAGCTAATGCAAATGACACATATCATGATCCACCCCCATCATCATCATCCAGCACTCAGGCAGTTTCTGATCATTATGATAGCGATCCCATAATTCAGCCATTTGAATCGTTGGCTATGACAGATTCTGAATCTTCTTCGAGATATCGTCAAGCCTTGGGTCATAACCCAATGAATGTACCTCTTGTGGAGTCTTTCTTTCCTCCTCTCGCCACGGCACCCAGCAGCAGTAAGGCAAATGTTCTCCATTCAGGTCAGGGTTGGCCAGCCCCAAATCGTGGATCAGTCCCACTATCAAGTAGTTCAACTCAATCTAAGGTTGCAAATATTGCACCTGTGCCATCATCTAGTCTGGATCAGGTTAAGTCAGCAACTGGTAGTGGATCTGCTCCAAACAGCTATGCTAGTTTTGCTCAGGCTCGACCCACAACAGTGCATGGATTTGCATCATCTGGTTCTTCAAGTAACTCAGGCAGCATAAGTAGGATCAGCCACTCTGCATCAGCCCCAAATCTTGCTGATAGCAGATCTTTTGATCCTTCTATGTCTGATTTTCCTCCAGTTTCTGCGACACAAAAGCAAAAGTTGCCAACAATTACCCAGCCCGTGCTGAATGCAGAAGCTGTTCACACTGCAAACAAGTCTCTGGTGGAAAAGATCCGTGCTGCTCTTGAATTTGATGAAGACAAATACACCGCTTTTAAAGACATATCCGGGCAGTATCGGCAAGGTTCAATTGACACCGCAGTATATCTGGCTTATGTTCAGCAGTTTGGTTTGTCACATCTTGTTCTTGAATTGGCTAGACTCTGTCCTGATGCTCAGAAGCAGAAAGAACTTTTAGAGACCTATAATGCTAGTGTACGGAGCAGTGGTAAAGGAAAACCTGTAGTTGTGGAGGACAGTAATGTGAAGGATACATTAGCAGATAACATCATTAACACAGTTAGGAACCTTCGGTCCACCTTCAAGCCTTCAGAAGAAGAGGTGGAGGTGTTGTCAAAGGATGGGTACCGTGGTGCAAAAGGCAAATCAAAGGGAGTGCCATCAGCGGGTGGTGGATCTAATCAAAATTTAGGGGCTGTGAGTGGAGGAAGTCAGCGACGAAAGAAAGCATCAAAATTCCTCAGAGCCCGTCTGGGTGATGGTTCAGTGGGTGCACTTCTGAACTCCCAAGATCCTGACCCAGATCCAGATCCAGTGGAGGAAACATTAGATGCAAACATGAATCCGGCTGAAGGCTTACCAGTTCATGGTGTTTGGCGGAATGGTGGTGGTATTGTTGAAATGAATGGACAACTTCAATGGTTGTCTACCTCTCATGAACCCTTCTTTTAA | 2343 | 44.94 | MDDSCAVCAETLEWVSYGPCGHRDVCSTCVARLRFICDDRRCCICKTECNVVFVTKALGDYTRMVNDFSILPTESREGQVGMYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDQMEEQSNDGSKRRQKFRNIDQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHINTGDSEVDGNEAERGGFMGHPMCDFCRSPFYGDNELYSHMSTEHYTCHICQRQNPGQFEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRRSTEQDQRRGRGRTFNRDSSADQLSLAIQASLETANANDTYHDPPPSSSSSTQAVSDHYDSDPIIQPFESLAMTDSESSSRYRQALGHNPMNVPLVESFFPPLATAPSSSKANVLHSGQGWPAPNRGSVPLSSSSTQSKVANIAPVPSSSLDQVKSATGSGSAPNSYASFAQARPTTVHGFASSGSSSNSGSISRISHSASAPNLADSRSFDPSMSDFPPVSATQKQKLPTITQPVLNAEAVHTANKSLVEKIRAALEFDEDKYTAFKDISGQYRQGSIDTAVYLAYVQQFGLSHLVLELARLCPDAQKQKELLETYNASVRSSGKGKPVVVEDSNVKDTLADNIINTVRNLRSTFKPSEEEVEVLSKDGYRGAKGKSKGVPSAGGGSNQNLGAVSGGSQRRKKASKFLRARLGDGSVGALLNSQDPDPDPDPVEETLDANMNPAEGLPVHGVWRNGGGIVEMNGQLQWLSTSHEPFF* | 781 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4578716 | 4584812 | + | Vvi7g457 | Vvi7g457 | 789323 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g457 | 780 | MobiDBLite | consensus disorder prediction | 428 | 529 | - | - | |
Vvi7g457 | 780 | MobiDBLite | consensus disorder prediction | 660 | 706 | - | - | |
Vvi7g457 | 780 | ProSiteProfiles | Zinc finger RING-type profile. | 5 | 46 | IPR001841 | - | |
Vvi7g457 | 780 | MobiDBLite | consensus disorder prediction | 339 | 361 | - | - | |
Vvi7g457 | 780 | MobiDBLite | consensus disorder prediction | 303 | 318 | - | - | |
Vvi7g457 | 780 | CDD | RING-HC_ZNF598 | 5 | 46 | IPR041888 | - | |
Vvi7g457 | 780 | MobiDBLite | consensus disorder prediction | 685 | 699 | - | - | |
Vvi7g457 | 780 | MobiDBLite | consensus disorder prediction | 303 | 322 | - | - | |
Vvi7g457 | 780 | SMART | c2h2final6 | 220 | 250 | IPR013087 | - | |
Vvi7g457 | 780 | SMART | c2h2final6 | 196 | 219 | IPR013087 | - | |
Vvi7g457 | 780 | SMART | c2h2final6 | 251 | 280 | IPR013087 | - | |
Vvi7g457 | 780 | SMART | c2h2final6 | 108 | 144 | IPR013087 | - | |
Vvi7g457 | 780 | MobiDBLite | consensus disorder prediction | 339 | 363 | - | - | |
Vvi7g457 | 780 | MobiDBLite | consensus disorder prediction | 409 | 529 | - | - | |
Vvi7g457 | 780 | PANTHER | EBR1 | 1 | 761 | - | - | |
Vvi7g457 | 780 | MobiDBLite | consensus disorder prediction | 718 | 742 | - | - | |
Vvi7g457 | 780 | PANTHER | ZINC FINGER PROTEIN 598 | 1 | 761 | IPR044288 | GO:0061630|GO:0072344 | |
Vvi7g457 | 780 | MobiDBLite | consensus disorder prediction | 660 | 677 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g457 | K22381 | - | vvi:100262296 | 1465.29 |