Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g460 ATGGCCACCATGGCTCTCTCATCTCCATTTGTAGGCAAGCCATCTGGAAGCCCCTGGTATGGCCCTGACCGTGTTAAGTACCTGGGACCATTTTCTGGTGAGCCTCCATCCTACCTTACCGGTGAGTTCCCTGGTGACTATGGGTGGGACACTGCAGGACTATCAGCAGATCCCGAAACCTTTGCCAAGAACCGAGAGCTCGAGGTGATTCACTGCAGGTGGGCAATGCTTGGGGCTTTGGGATGTGTCTTCCCTGAGCTTCTCTCCAGAAATGGAGTCAAGTTTGGTGAGGCAGTGTGGTTCAAGGCTGCCATATGGGCTTGCCAGGTTATCCTCATGGGTGCTGTTGAGGGGTACCGCATTGGAGGAGGACCTCTTGGTGAGGTGAAGGAAATCAAGAACGGGCGTCTTGCCATGTTCTCCATGTTTGGTTTCTTTGTGCAGGCTATTGTAACCGGCAAAGGACCTTTGGAGAACCTTGCTGACCATCTAGCCGACCCAGTGAACAACAACGCCTGGGCCTATGCCACCAACTTTGTGCCTGGGAAGTGA 552 53.62 MATMALSSPFVGKPSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAAIWACQVILMGAVEGYRIGGGPLGEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4604938 4605913 - Vvi7g460 Vvi7g460 789326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g460 183 Gene3D Chlorophyll a/b binding protein domain 26 105 - -
Vvi7g460 183 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 104 129 IPR001344 GO:0009765|GO:0016020
Vvi7g460 183 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 15 104 IPR001344 GO:0009765|GO:0016020
Vvi7g460 183 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 129 183 IPR001344 GO:0009765|GO:0016020
Vvi7g460 183 Gene3D Chlorophyll a/b binding protein domain 125 180 - -
Vvi7g460 183 Pfam Chlorophyll A-B binding protein 129 149 IPR022796 -
Vvi7g460 183 Pfam Chlorophyll A-B binding protein 35 123 IPR022796 -
Vvi7g460 183 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 129 183 - -
Vvi7g460 183 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 15 104 - -
Vvi7g460 183 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 104 129 - -
Vvi7g460 183 SUPERFAMILY Chlorophyll a-b binding protein 18 180 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g460 K08912 - vvi:100252066 345.125